Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
LINC00474Q9P2X8 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
LINC00474Q9P2X8 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
LINC00474Q9P2X8 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC11.81□□□□□ -0.52
LINC00474Q9P2X8 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00474Q9P2X8 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00474Q9P2X8 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC11.81□□□□□ -0.52
LINC00474Q9P2X8 AC009102.3-201ENST00000623118 1491 ntBASIC11.81□□□□□ -0.52
LINC00474Q9P2X8 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC11.81□□□□□ -0.52
LINC00474Q9P2X8 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00474Q9P2X8 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00474Q9P2X8 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00474Q9P2X8 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00474Q9P2X8 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00474Q9P2X8 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00474Q9P2X8 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00474Q9P2X8 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
LINC00474Q9P2X8 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00474Q9P2X8 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC00474Q9P2X8 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC00474Q9P2X8 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC00474Q9P2X8 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC00474Q9P2X8 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
LINC00474Q9P2X8 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
LINC00474Q9P2X8 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
LINC00474Q9P2X8 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC11.8□□□□□ -0.52
LINC00474Q9P2X8 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
LINC00474Q9P2X8 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC00474Q9P2X8 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
LINC00474Q9P2X8 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC11.8□□□□□ -0.52
LINC00474Q9P2X8 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
LINC00474Q9P2X8 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC00474Q9P2X8 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
LINC00474Q9P2X8 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC00474Q9P2X8 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
LINC00474Q9P2X8 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC00474Q9P2X8 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC00474Q9P2X8 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
LINC00474Q9P2X8 Telomerase-vert.1-201ENST00000363312 438 ntBASIC11.8□□□□□ -0.52
LINC00474Q9P2X8 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
LINC00474Q9P2X8 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
LINC00474Q9P2X8 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC11.8□□□□□ -0.52
LINC00474Q9P2X8 AC092647.4-201ENST00000457211 535 ntBASIC11.8□□□□□ -0.52
LINC00474Q9P2X8 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
LINC00474Q9P2X8 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC11.8□□□□□ -0.52
LINC00474Q9P2X8 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC11.8□□□□□ -0.52
LINC00474Q9P2X8 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC11.8□□□□□ -0.52
LINC00474Q9P2X8 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC11.8□□□□□ -0.52
LINC00474Q9P2X8 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC11.8□□□□□ -0.52
LINC00474Q9P2X8 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC00474Q9P2X8 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC11.8□□□□□ -0.52
LINC00474Q9P2X8 AL163051.1-201ENST00000569214 1512 ntBASIC11.8□□□□□ -0.52
LINC00474Q9P2X8 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC00474Q9P2X8 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC11.8□□□□□ -0.52
LINC00474Q9P2X8 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC00474Q9P2X8 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
LINC00474Q9P2X8 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00474Q9P2X8 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00474Q9P2X8 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00474Q9P2X8 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00474Q9P2X8 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00474Q9P2X8 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC11.79□□□□□ -0.52
LINC00474Q9P2X8 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC11.79□□□□□ -0.52
LINC00474Q9P2X8 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00474Q9P2X8 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
LINC00474Q9P2X8 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00474Q9P2X8 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00474Q9P2X8 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00474Q9P2X8 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC11.79□□□□□ -0.52
LINC00474Q9P2X8 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00474Q9P2X8 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00474Q9P2X8 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00474Q9P2X8 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00474Q9P2X8 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00474Q9P2X8 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
LINC00474Q9P2X8 AC005521.1-201ENST00000393351 872 ntBASIC11.79□□□□□ -0.52
LINC00474Q9P2X8 RNF152P1-201ENST00000397754 604 ntBASIC11.79□□□□□ -0.52
LINC00474Q9P2X8 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC11.79□□□□□ -0.52
LINC00474Q9P2X8 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC11.79□□□□□ -0.52
LINC00474Q9P2X8 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00474Q9P2X8 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC11.79□□□□□ -0.52
LINC00474Q9P2X8 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC11.79□□□□□ -0.52
LINC00474Q9P2X8 TK2-213ENST00000563369 882 ntTSL 5 BASIC11.79□□□□□ -0.52
LINC00474Q9P2X8 AC010240.3-201ENST00000607688 395 ntBASIC11.79□□□□□ -0.52
LINC00474Q9P2X8 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00474Q9P2X8 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00474Q9P2X8 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00474Q9P2X8 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00474Q9P2X8 AC124067.4-201ENST00000519691 2379 ntBASIC11.79□□□□□ -0.52
LINC00474Q9P2X8 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
LINC00474Q9P2X8 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00474Q9P2X8 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00474Q9P2X8 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC11.79□□□□□ -0.52
LINC00474Q9P2X8 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00474Q9P2X8 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC11.79□□□□□ -0.52
LINC00474Q9P2X8 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00474Q9P2X8 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00474Q9P2X8 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC11.79□□□□□ -0.52
LINC00474Q9P2X8 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00474Q9P2X8 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms