Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.84■□□□□ 0.29
RLIMQ9NVW2 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.84■□□□□ 0.29
RLIMQ9NVW2 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RLIMQ9NVW2 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RLIMQ9NVW2 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
RLIMQ9NVW2 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.84■□□□□ 0.29
RLIMQ9NVW2 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RLIMQ9NVW2 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
RLIMQ9NVW2 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RLIMQ9NVW2 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.84■□□□□ 0.29
RLIMQ9NVW2 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.84■□□□□ 0.29
RLIMQ9NVW2 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
RLIMQ9NVW2 SIRPAP1-201ENST00000448467 1770 ntBASIC16.84■□□□□ 0.29
RLIMQ9NVW2 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RLIMQ9NVW2 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RLIMQ9NVW2 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RLIMQ9NVW2 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RLIMQ9NVW2 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RLIMQ9NVW2 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.84■□□□□ 0.29
RLIMQ9NVW2 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RLIMQ9NVW2 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RLIMQ9NVW2 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
RLIMQ9NVW2 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RLIMQ9NVW2 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.83■□□□□ 0.29
RLIMQ9NVW2 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
RLIMQ9NVW2 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RLIMQ9NVW2 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
RLIMQ9NVW2 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RLIMQ9NVW2 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
RLIMQ9NVW2 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RLIMQ9NVW2 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RLIMQ9NVW2 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
RLIMQ9NVW2 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
RLIMQ9NVW2 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.83■□□□□ 0.28
RLIMQ9NVW2 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
RLIMQ9NVW2 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.83■□□□□ 0.28
RLIMQ9NVW2 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RLIMQ9NVW2 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.83■□□□□ 0.28
RLIMQ9NVW2 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RLIMQ9NVW2 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.83■□□□□ 0.28
RLIMQ9NVW2 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.83■□□□□ 0.28
RLIMQ9NVW2 AC009947.2-201ENST00000444014 672 ntBASIC16.83■□□□□ 0.28
RLIMQ9NVW2 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RLIMQ9NVW2 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RLIMQ9NVW2 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.28
RLIMQ9NVW2 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.83■□□□□ 0.28
RLIMQ9NVW2 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.83■□□□□ 0.28
RLIMQ9NVW2 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.83■□□□□ 0.28
RLIMQ9NVW2 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RLIMQ9NVW2 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.83■□□□□ 0.28
RLIMQ9NVW2 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.83■□□□□ 0.28
RLIMQ9NVW2 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RLIMQ9NVW2 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RLIMQ9NVW2 AC006116.8-202ENST00000587620 1550 ntBASIC16.83■□□□□ 0.28
RLIMQ9NVW2 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.83■□□□□ 0.28
RLIMQ9NVW2 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.83■□□□□ 0.28
RLIMQ9NVW2 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RLIMQ9NVW2 AC024243.1-201ENST00000609234 778 ntBASIC16.83■□□□□ 0.28
RLIMQ9NVW2 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RLIMQ9NVW2 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.83■□□□□ 0.28
RLIMQ9NVW2 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RLIMQ9NVW2 AC141586.5-201ENST00000624546 2050 ntBASIC16.83■□□□□ 0.28
RLIMQ9NVW2 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RLIMQ9NVW2 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
RLIMQ9NVW2 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.83■□□□□ 0.28
RLIMQ9NVW2 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.83■□□□□ 0.28
RLIMQ9NVW2 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RLIMQ9NVW2 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RLIMQ9NVW2 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RLIMQ9NVW2 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RLIMQ9NVW2 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RLIMQ9NVW2 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
RLIMQ9NVW2 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RLIMQ9NVW2 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.82■□□□□ 0.28
RLIMQ9NVW2 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RLIMQ9NVW2 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RLIMQ9NVW2 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.82■□□□□ 0.28
RLIMQ9NVW2 LINC01568-207ENST00000641790 1380 ntBASIC16.82■□□□□ 0.28
RLIMQ9NVW2 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RLIMQ9NVW2 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RLIMQ9NVW2 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RLIMQ9NVW2 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.82■□□□□ 0.28
RLIMQ9NVW2 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RLIMQ9NVW2 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RLIMQ9NVW2 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RLIMQ9NVW2 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RLIMQ9NVW2 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.82■□□□□ 0.28
RLIMQ9NVW2 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RLIMQ9NVW2 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.82■□□□□ 0.28
RLIMQ9NVW2 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RLIMQ9NVW2 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RLIMQ9NVW2 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RLIMQ9NVW2 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RLIMQ9NVW2 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.82■□□□□ 0.28
RLIMQ9NVW2 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.82■□□□□ 0.28
RLIMQ9NVW2 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.82■□□□□ 0.28
RLIMQ9NVW2 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RLIMQ9NVW2 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RLIMQ9NVW2 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RLIMQ9NVW2 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms