Protein–RNA interactions for Protein: Q9NUQ8

ABCF3, ATP-binding cassette sub-family F member 3, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3Q9NUQ8 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
ABCF3Q9NUQ8 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ABCF3Q9NUQ8 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ABCF3Q9NUQ8 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
ABCF3Q9NUQ8 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
ABCF3Q9NUQ8 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ABCF3Q9NUQ8 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ABCF3Q9NUQ8 MIR1238-201ENST00000408483 83 ntBASIC18.4■□□□□ 0.54
ABCF3Q9NUQ8 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.4■□□□□ 0.54
ABCF3Q9NUQ8 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ABCF3Q9NUQ8 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.4■□□□□ 0.54
ABCF3Q9NUQ8 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
ABCF3Q9NUQ8 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.4■□□□□ 0.54
ABCF3Q9NUQ8 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ABCF3Q9NUQ8 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.4■□□□□ 0.54
ABCF3Q9NUQ8 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ABCF3Q9NUQ8 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ABCF3Q9NUQ8 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ABCF3Q9NUQ8 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
ABCF3Q9NUQ8 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ABCF3Q9NUQ8 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.4■□□□□ 0.54
ABCF3Q9NUQ8 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ABCF3Q9NUQ8 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
ABCF3Q9NUQ8 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.54
ABCF3Q9NUQ8 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ABCF3Q9NUQ8 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ABCF3Q9NUQ8 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.39■□□□□ 0.53
ABCF3Q9NUQ8 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ABCF3Q9NUQ8 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ABCF3Q9NUQ8 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.39■□□□□ 0.53
ABCF3Q9NUQ8 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
ABCF3Q9NUQ8 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.39■□□□□ 0.53
ABCF3Q9NUQ8 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.39■□□□□ 0.53
ABCF3Q9NUQ8 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
ABCF3Q9NUQ8 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.39■□□□□ 0.53
ABCF3Q9NUQ8 PRSS44-201ENST00000515154 1146 ntBASIC18.39■□□□□ 0.53
ABCF3Q9NUQ8 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.39■□□□□ 0.53
ABCF3Q9NUQ8 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
ABCF3Q9NUQ8 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.39■□□□□ 0.53
ABCF3Q9NUQ8 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.39■□□□□ 0.53
ABCF3Q9NUQ8 AP000692.2-201ENST00000608391 879 ntBASIC18.39■□□□□ 0.53
ABCF3Q9NUQ8 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.39■□□□□ 0.53
ABCF3Q9NUQ8 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
ABCF3Q9NUQ8 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ABCF3Q9NUQ8 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
ABCF3Q9NUQ8 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ABCF3Q9NUQ8 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ABCF3Q9NUQ8 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.39■□□□□ 0.53
ABCF3Q9NUQ8 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ABCF3Q9NUQ8 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
ABCF3Q9NUQ8 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.39■□□□□ 0.53
ABCF3Q9NUQ8 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ABCF3Q9NUQ8 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ABCF3Q9NUQ8 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ABCF3Q9NUQ8 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.38■□□□□ 0.53
ABCF3Q9NUQ8 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ABCF3Q9NUQ8 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ABCF3Q9NUQ8 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
ABCF3Q9NUQ8 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ABCF3Q9NUQ8 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.38■□□□□ 0.53
ABCF3Q9NUQ8 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
ABCF3Q9NUQ8 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ABCF3Q9NUQ8 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ABCF3Q9NUQ8 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
ABCF3Q9NUQ8 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ABCF3Q9NUQ8 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.38■□□□□ 0.53
ABCF3Q9NUQ8 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ABCF3Q9NUQ8 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.38■□□□□ 0.53
ABCF3Q9NUQ8 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.38■□□□□ 0.53
ABCF3Q9NUQ8 CKBP1-201ENST00000565489 1086 ntBASIC18.38■□□□□ 0.53
ABCF3Q9NUQ8 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.38■□□□□ 0.53
ABCF3Q9NUQ8 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.38■□□□□ 0.53
ABCF3Q9NUQ8 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ABCF3Q9NUQ8 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
ABCF3Q9NUQ8 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ABCF3Q9NUQ8 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.38■□□□□ 0.53
ABCF3Q9NUQ8 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ABCF3Q9NUQ8 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ABCF3Q9NUQ8 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
ABCF3Q9NUQ8 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ABCF3Q9NUQ8 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ABCF3Q9NUQ8 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ABCF3Q9NUQ8 HEIH-201ENST00000623091 1652 ntBASIC18.38■□□□□ 0.53
ABCF3Q9NUQ8 AC046158.3-201ENST00000624947 2558 ntBASIC18.37■□□□□ 0.53
ABCF3Q9NUQ8 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ABCF3Q9NUQ8 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ABCF3Q9NUQ8 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
ABCF3Q9NUQ8 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ABCF3Q9NUQ8 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ABCF3Q9NUQ8 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ABCF3Q9NUQ8 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
ABCF3Q9NUQ8 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
ABCF3Q9NUQ8 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.37■□□□□ 0.53
ABCF3Q9NUQ8 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ABCF3Q9NUQ8 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ABCF3Q9NUQ8 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ABCF3Q9NUQ8 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.37■□□□□ 0.53
ABCF3Q9NUQ8 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ABCF3Q9NUQ8 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
ABCF3Q9NUQ8 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms