Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
SND1-IT1Q9HBX3 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SND1-IT1Q9HBX3 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SND1-IT1Q9HBX3 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SND1-IT1Q9HBX3 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC12.13□□□□□ -0.47
SND1-IT1Q9HBX3 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SND1-IT1Q9HBX3 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SND1-IT1Q9HBX3 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
SND1-IT1Q9HBX3 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SND1-IT1Q9HBX3 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SND1-IT1Q9HBX3 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SND1-IT1Q9HBX3 NME9-203ENST00000383180 2133 ntTSL 2 BASIC12.13□□□□□ -0.47
SND1-IT1Q9HBX3 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
SND1-IT1Q9HBX3 BANP-227ENST00000626016 2144 ntTSL 2 BASIC12.13□□□□□ -0.47
SND1-IT1Q9HBX3 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SND1-IT1Q9HBX3 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SND1-IT1Q9HBX3 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC12.13□□□□□ -0.47
SND1-IT1Q9HBX3 PP12613-201ENST00000424958 2230 ntBASIC12.13□□□□□ -0.47
SND1-IT1Q9HBX3 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SND1-IT1Q9HBX3 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
SND1-IT1Q9HBX3 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC12.12□□□□□ -0.47
SND1-IT1Q9HBX3 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SND1-IT1Q9HBX3 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SND1-IT1Q9HBX3 KRT8P11-201ENST00000409686 1436 ntBASIC12.12□□□□□ -0.47
SND1-IT1Q9HBX3 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SND1-IT1Q9HBX3 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SND1-IT1Q9HBX3 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SND1-IT1Q9HBX3 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SND1-IT1Q9HBX3 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SND1-IT1Q9HBX3 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SND1-IT1Q9HBX3 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SND1-IT1Q9HBX3 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC12.12□□□□□ -0.47
SND1-IT1Q9HBX3 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
SND1-IT1Q9HBX3 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC12.12□□□□□ -0.47
SND1-IT1Q9HBX3 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC12.12□□□□□ -0.47
SND1-IT1Q9HBX3 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
SND1-IT1Q9HBX3 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SND1-IT1Q9HBX3 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
SND1-IT1Q9HBX3 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SND1-IT1Q9HBX3 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC12.12□□□□□ -0.47
SND1-IT1Q9HBX3 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC12.12□□□□□ -0.47
SND1-IT1Q9HBX3 POM121L13P-201ENST00000422362 380 ntBASIC12.12□□□□□ -0.47
SND1-IT1Q9HBX3 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
SND1-IT1Q9HBX3 Z85996.1-201ENST00000494644 937 ntBASIC12.12□□□□□ -0.47
SND1-IT1Q9HBX3 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC12.12□□□□□ -0.47
SND1-IT1Q9HBX3 UNC93B4-201ENST00000505679 747 ntBASIC12.12□□□□□ -0.47
SND1-IT1Q9HBX3 GLRB-205ENST00000512619 728 ntTSL 3 BASIC12.12□□□□□ -0.47
SND1-IT1Q9HBX3 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC12.12□□□□□ -0.47
SND1-IT1Q9HBX3 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
SND1-IT1Q9HBX3 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SND1-IT1Q9HBX3 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC12.12□□□□□ -0.47
SND1-IT1Q9HBX3 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SND1-IT1Q9HBX3 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SND1-IT1Q9HBX3 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SND1-IT1Q9HBX3 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
SND1-IT1Q9HBX3 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
SND1-IT1Q9HBX3 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
SND1-IT1Q9HBX3 HLA-DQB1-201ENST00000374943 1656 ntBASIC12.12□□□□□ -0.47
SND1-IT1Q9HBX3 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC12.12□□□□□ -0.47
SND1-IT1Q9HBX3 HARS-201ENST00000307633 1780 ntTSL 2 BASIC12.12□□□□□ -0.47
SND1-IT1Q9HBX3 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
SND1-IT1Q9HBX3 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC12.12□□□□□ -0.47
SND1-IT1Q9HBX3 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SND1-IT1Q9HBX3 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
SND1-IT1Q9HBX3 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC12.12□□□□□ -0.47
SND1-IT1Q9HBX3 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC12.11□□□□□ -0.47
SND1-IT1Q9HBX3 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SND1-IT1Q9HBX3 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SND1-IT1Q9HBX3 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
SND1-IT1Q9HBX3 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SND1-IT1Q9HBX3 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC12.11□□□□□ -0.47
SND1-IT1Q9HBX3 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SND1-IT1Q9HBX3 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SND1-IT1Q9HBX3 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC12.11□□□□□ -0.47
SND1-IT1Q9HBX3 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
SND1-IT1Q9HBX3 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SND1-IT1Q9HBX3 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
SND1-IT1Q9HBX3 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SND1-IT1Q9HBX3 F11R-206ENST00000621309 4770 ntTSL 5 BASIC12.11□□□□□ -0.47
SND1-IT1Q9HBX3 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SND1-IT1Q9HBX3 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SND1-IT1Q9HBX3 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SND1-IT1Q9HBX3 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SND1-IT1Q9HBX3 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SND1-IT1Q9HBX3 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SND1-IT1Q9HBX3 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
SND1-IT1Q9HBX3 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
SND1-IT1Q9HBX3 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC12.11□□□□□ -0.47
SND1-IT1Q9HBX3 MYLKP1-201ENST00000509077 1580 ntBASIC12.11□□□□□ -0.47
SND1-IT1Q9HBX3 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SND1-IT1Q9HBX3 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC12.11□□□□□ -0.47
SND1-IT1Q9HBX3 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC12.11□□□□□ -0.47
SND1-IT1Q9HBX3 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SND1-IT1Q9HBX3 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SND1-IT1Q9HBX3 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
SND1-IT1Q9HBX3 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SND1-IT1Q9HBX3 NCF1B-203ENST00000435988 1254 ntBASIC12.11□□□□□ -0.47
SND1-IT1Q9HBX3 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SND1-IT1Q9HBX3 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SND1-IT1Q9HBX3 PPP1R14BP3-201ENST00000509033 445 ntBASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms