Protein–RNA interactions for Protein: Q9H2X0

CHRD, Chordin, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDQ9H2X0 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CHRDQ9H2X0 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHRDQ9H2X0 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHRDQ9H2X0 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHRDQ9H2X0 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHRDQ9H2X0 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHRDQ9H2X0 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHRDQ9H2X0 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHRDQ9H2X0 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CHRDQ9H2X0 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHRDQ9H2X0 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.04■□□□□ 0.48
CHRDQ9H2X0 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.04■□□□□ 0.48
CHRDQ9H2X0 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHRDQ9H2X0 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHRDQ9H2X0 AL161938.1-201ENST00000569833 2180 ntBASIC18.04■□□□□ 0.48
CHRDQ9H2X0 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.04■□□□□ 0.48
CHRDQ9H2X0 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.04■□□□□ 0.48
CHRDQ9H2X0 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.04■□□□□ 0.48
CHRDQ9H2X0 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHRDQ9H2X0 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHRDQ9H2X0 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.04■□□□□ 0.48
CHRDQ9H2X0 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CHRDQ9H2X0 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHRDQ9H2X0 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.04■□□□□ 0.48
CHRDQ9H2X0 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHRDQ9H2X0 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CHRDQ9H2X0 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CHRDQ9H2X0 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.04■□□□□ 0.48
CHRDQ9H2X0 AC254562.1-201ENST00000417586 456 ntBASIC18.04■□□□□ 0.48
CHRDQ9H2X0 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.04■□□□□ 0.48
CHRDQ9H2X0 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CHRDQ9H2X0 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.04■□□□□ 0.48
CHRDQ9H2X0 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CHRDQ9H2X0 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.04■□□□□ 0.48
CHRDQ9H2X0 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
CHRDQ9H2X0 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC18.04■□□□□ 0.48
CHRDQ9H2X0 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.04■□□□□ 0.48
CHRDQ9H2X0 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CHRDQ9H2X0 SIGLEC16-201ENST00000599858 1437 ntBASIC18.04■□□□□ 0.48
CHRDQ9H2X0 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHRDQ9H2X0 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.04■□□□□ 0.48
CHRDQ9H2X0 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHRDQ9H2X0 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.03■□□□□ 0.48
CHRDQ9H2X0 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CHRDQ9H2X0 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CHRDQ9H2X0 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CHRDQ9H2X0 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHRDQ9H2X0 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHRDQ9H2X0 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHRDQ9H2X0 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.03■□□□□ 0.48
CHRDQ9H2X0 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CHRDQ9H2X0 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHRDQ9H2X0 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CHRDQ9H2X0 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHRDQ9H2X0 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CHRDQ9H2X0 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.03■□□□□ 0.48
CHRDQ9H2X0 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.03■□□□□ 0.48
CHRDQ9H2X0 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.03■□□□□ 0.48
CHRDQ9H2X0 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.03■□□□□ 0.48
CHRDQ9H2X0 MIR4469-201ENST00000583919 79 ntBASIC18.03■□□□□ 0.48
CHRDQ9H2X0 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.03■□□□□ 0.48
CHRDQ9H2X0 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHRDQ9H2X0 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHRDQ9H2X0 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
CHRDQ9H2X0 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CHRDQ9H2X0 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.03■□□□□ 0.48
CHRDQ9H2X0 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHRDQ9H2X0 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CHRDQ9H2X0 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CHRDQ9H2X0 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
CHRDQ9H2X0 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
CHRDQ9H2X0 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.02■□□□□ 0.48
CHRDQ9H2X0 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.48
CHRDQ9H2X0 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CHRDQ9H2X0 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CHRDQ9H2X0 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.02■□□□□ 0.48
CHRDQ9H2X0 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.02■□□□□ 0.48
CHRDQ9H2X0 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC18.02■□□□□ 0.48
CHRDQ9H2X0 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CHRDQ9H2X0 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.02■□□□□ 0.48
CHRDQ9H2X0 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.02■□□□□ 0.48
CHRDQ9H2X0 ALG1L5P-201ENST00000482043 771 ntBASIC18.02■□□□□ 0.48
CHRDQ9H2X0 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CHRDQ9H2X0 AC122714.2-201ENST00000502787 707 ntBASIC18.02■□□□□ 0.48
CHRDQ9H2X0 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.02■□□□□ 0.48
CHRDQ9H2X0 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
CHRDQ9H2X0 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.02■□□□□ 0.48
CHRDQ9H2X0 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.02■□□□□ 0.48
CHRDQ9H2X0 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
CHRDQ9H2X0 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC18.02■□□□□ 0.48
CHRDQ9H2X0 AD001527.2-201ENST00000622994 785 ntBASIC18.02■□□□□ 0.48
CHRDQ9H2X0 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.02■□□□□ 0.48
CHRDQ9H2X0 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
CHRDQ9H2X0 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
CHRDQ9H2X0 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CHRDQ9H2X0 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CHRDQ9H2X0 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CHRDQ9H2X0 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.02■□□□□ 0.47
CHRDQ9H2X0 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CHRDQ9H2X0 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms