Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF39Q9H2S5 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
RNF39Q9H2S5 AC012321.1-201ENST00000561622 1588 ntBASIC20.12■□□□□ 0.81
RNF39Q9H2S5 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.12■□□□□ 0.81
RNF39Q9H2S5 AP001002.1-201ENST00000625148 1513 ntBASIC20.12■□□□□ 0.81
RNF39Q9H2S5 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.12■□□□□ 0.81
RNF39Q9H2S5 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF39Q9H2S5 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF39Q9H2S5 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
RNF39Q9H2S5 AC131097.1-201ENST00000437438 739 ntTSL 3 BASIC20.12■□□□□ 0.81
RNF39Q9H2S5 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
RNF39Q9H2S5 AC092106.1-201ENST00000444291 373 ntBASIC20.12■□□□□ 0.81
RNF39Q9H2S5 AC092164.1-203ENST00000444501 723 ntTSL 3 BASIC20.12■□□□□ 0.81
RNF39Q9H2S5 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC20.12■□□□□ 0.81
RNF39Q9H2S5 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC20.12■□□□□ 0.81
RNF39Q9H2S5 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF39Q9H2S5 AC011632.1-203ENST00000522914 454 ntTSL 3 BASIC20.12■□□□□ 0.81
RNF39Q9H2S5 AC079414.2-201ENST00000567157 1104 ntBASIC20.12■□□□□ 0.81
RNF39Q9H2S5 AC020978.7-201ENST00000575953 1187 ntBASIC20.12■□□□□ 0.81
RNF39Q9H2S5 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC20.12■□□□□ 0.81
RNF39Q9H2S5 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC20.12■□□□□ 0.81
RNF39Q9H2S5 AL049840.6-202ENST00000603373 279 ntBASIC20.12■□□□□ 0.81
RNF39Q9H2S5 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC20.12■□□□□ 0.81
RNF39Q9H2S5 AC092119.3-201ENST00000612618 583 ntBASIC20.12■□□□□ 0.81
RNF39Q9H2S5 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.12■□□□□ 0.81
RNF39Q9H2S5 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF39Q9H2S5 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF39Q9H2S5 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF39Q9H2S5 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF39Q9H2S5 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF39Q9H2S5 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF39Q9H2S5 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RNF39Q9H2S5 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
RNF39Q9H2S5 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF39Q9H2S5 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF39Q9H2S5 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.11■□□□□ 0.81
RNF39Q9H2S5 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
RNF39Q9H2S5 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
RNF39Q9H2S5 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF39Q9H2S5 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RNF39Q9H2S5 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF39Q9H2S5 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
RNF39Q9H2S5 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
RNF39Q9H2S5 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF39Q9H2S5 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF39Q9H2S5 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF39Q9H2S5 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
RNF39Q9H2S5 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.11■□□□□ 0.81
RNF39Q9H2S5 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF39Q9H2S5 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RNF39Q9H2S5 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC20.11■□□□□ 0.81
RNF39Q9H2S5 KRT18P48-201ENST00000434763 852 ntBASIC20.11■□□□□ 0.81
RNF39Q9H2S5 DUSP5P1-201ENST00000441325 1139 ntBASIC20.11■□□□□ 0.81
RNF39Q9H2S5 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC20.11■□□□□ 0.81
RNF39Q9H2S5 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC20.11■□□□□ 0.81
RNF39Q9H2S5 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC20.11■□□□□ 0.81
RNF39Q9H2S5 NRON-201ENST00000517270 370 ntBASIC20.11■□□□□ 0.81
RNF39Q9H2S5 HNRNPA1P5-201ENST00000558213 966 ntBASIC20.11■□□□□ 0.81
RNF39Q9H2S5 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF39Q9H2S5 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
RNF39Q9H2S5 AC025811.1-201ENST00000604312 472 ntBASIC20.11■□□□□ 0.81
RNF39Q9H2S5 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF39Q9H2S5 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC20.11■□□□□ 0.81
RNF39Q9H2S5 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC20.11■□□□□ 0.81
RNF39Q9H2S5 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
RNF39Q9H2S5 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF39Q9H2S5 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
RNF39Q9H2S5 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF39Q9H2S5 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RNF39Q9H2S5 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF39Q9H2S5 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RNF39Q9H2S5 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF39Q9H2S5 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RNF39Q9H2S5 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RNF39Q9H2S5 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.1■□□□□ 0.81
RNF39Q9H2S5 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF39Q9H2S5 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.1■□□□□ 0.81
RNF39Q9H2S5 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF39Q9H2S5 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
RNF39Q9H2S5 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF39Q9H2S5 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF39Q9H2S5 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
RNF39Q9H2S5 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF39Q9H2S5 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF39Q9H2S5 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RNF39Q9H2S5 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC20.1■□□□□ 0.81
RNF39Q9H2S5 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC20.1■□□□□ 0.81
RNF39Q9H2S5 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC20.1■□□□□ 0.81
RNF39Q9H2S5 USP9YP10-201ENST00000454868 628 ntBASIC20.1■□□□□ 0.81
RNF39Q9H2S5 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
RNF39Q9H2S5 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RNF39Q9H2S5 USP9YP5-201ENST00000511770 630 ntBASIC20.1■□□□□ 0.81
RNF39Q9H2S5 SDR16C6P-202ENST00000524136 955 ntBASIC20.1■□□□□ 0.81
RNF39Q9H2S5 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC20.1■□□□□ 0.81
RNF39Q9H2S5 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC20.1■□□□□ 0.81
RNF39Q9H2S5 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC20.1■□□□□ 0.81
RNF39Q9H2S5 CLEC4GP1-201ENST00000596555 870 ntBASIC20.1■□□□□ 0.81
RNF39Q9H2S5 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RNF39Q9H2S5 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
RNF39Q9H2S5 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms