Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.65■□□□□ 0.58
FOXP3Q9BZS1 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
FOXP3Q9BZS1 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
FOXP3Q9BZS1 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
FOXP3Q9BZS1 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
FOXP3Q9BZS1 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
FOXP3Q9BZS1 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FOXP3Q9BZS1 HMGA1P5-201ENST00000412453 271 ntBASIC18.65■□□□□ 0.58
FOXP3Q9BZS1 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
FOXP3Q9BZS1 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.65■□□□□ 0.58
FOXP3Q9BZS1 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.65■□□□□ 0.58
FOXP3Q9BZS1 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
FOXP3Q9BZS1 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
FOXP3Q9BZS1 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.65■□□□□ 0.58
FOXP3Q9BZS1 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
FOXP3Q9BZS1 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FOXP3Q9BZS1 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
FOXP3Q9BZS1 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FOXP3Q9BZS1 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
FOXP3Q9BZS1 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
FOXP3Q9BZS1 KRT8P7-201ENST00000533003 1432 ntBASIC18.65■□□□□ 0.58
FOXP3Q9BZS1 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.65■□□□□ 0.58
FOXP3Q9BZS1 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
FOXP3Q9BZS1 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
FOXP3Q9BZS1 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.64■□□□□ 0.58
FOXP3Q9BZS1 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
FOXP3Q9BZS1 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
FOXP3Q9BZS1 AC036111.1-201ENST00000533973 1582 ntBASIC18.64■□□□□ 0.58
FOXP3Q9BZS1 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
FOXP3Q9BZS1 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
FOXP3Q9BZS1 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
FOXP3Q9BZS1 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.64■□□□□ 0.57
FOXP3Q9BZS1 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
FOXP3Q9BZS1 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
FOXP3Q9BZS1 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.64■□□□□ 0.57
FOXP3Q9BZS1 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
FOXP3Q9BZS1 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
FOXP3Q9BZS1 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.64■□□□□ 0.57
FOXP3Q9BZS1 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
FOXP3Q9BZS1 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.64■□□□□ 0.57
FOXP3Q9BZS1 AC117947.1-201ENST00000427448 529 ntBASIC18.64■□□□□ 0.57
FOXP3Q9BZS1 CCR12P-201ENST00000446203 998 ntBASIC18.64■□□□□ 0.57
FOXP3Q9BZS1 AC022616.7-201ENST00000525383 220 ntBASIC18.64■□□□□ 0.57
FOXP3Q9BZS1 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
FOXP3Q9BZS1 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.64■□□□□ 0.57
FOXP3Q9BZS1 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
FOXP3Q9BZS1 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
FOXP3Q9BZS1 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
FOXP3Q9BZS1 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.64■□□□□ 0.57
FOXP3Q9BZS1 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
FOXP3Q9BZS1 HOXB1-202ENST00000577092 1414 ntBASIC18.64■□□□□ 0.57
FOXP3Q9BZS1 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.64■□□□□ 0.57
FOXP3Q9BZS1 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
FOXP3Q9BZS1 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.64■□□□□ 0.57
FOXP3Q9BZS1 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
FOXP3Q9BZS1 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.63■□□□□ 0.57
FOXP3Q9BZS1 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.63■□□□□ 0.57
FOXP3Q9BZS1 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FOXP3Q9BZS1 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
FOXP3Q9BZS1 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
FOXP3Q9BZS1 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
FOXP3Q9BZS1 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FOXP3Q9BZS1 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
FOXP3Q9BZS1 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FOXP3Q9BZS1 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
FOXP3Q9BZS1 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
FOXP3Q9BZS1 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.63■□□□□ 0.57
FOXP3Q9BZS1 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.63■□□□□ 0.57
FOXP3Q9BZS1 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.63■□□□□ 0.57
FOXP3Q9BZS1 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
FOXP3Q9BZS1 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
FOXP3Q9BZS1 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.63■□□□□ 0.57
FOXP3Q9BZS1 AC139887.4-201ENST00000607877 719 ntBASIC18.63■□□□□ 0.57
FOXP3Q9BZS1 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
FOXP3Q9BZS1 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
FOXP3Q9BZS1 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
FOXP3Q9BZS1 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.63■□□□□ 0.57
FOXP3Q9BZS1 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.63■□□□□ 0.57
FOXP3Q9BZS1 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
FOXP3Q9BZS1 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
FOXP3Q9BZS1 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FOXP3Q9BZS1 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
FOXP3Q9BZS1 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FOXP3Q9BZS1 AC139713.2-201ENST00000641328 2723 ntBASIC18.63■□□□□ 0.57
FOXP3Q9BZS1 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
FOXP3Q9BZS1 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
FOXP3Q9BZS1 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.63■□□□□ 0.57
FOXP3Q9BZS1 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.63■□□□□ 0.57
FOXP3Q9BZS1 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
FOXP3Q9BZS1 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FOXP3Q9BZS1 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FOXP3Q9BZS1 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.62■□□□□ 0.57
FOXP3Q9BZS1 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.62■□□□□ 0.57
FOXP3Q9BZS1 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
FOXP3Q9BZS1 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.62■□□□□ 0.57
FOXP3Q9BZS1 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
FOXP3Q9BZS1 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
FOXP3Q9BZS1 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
FOXP3Q9BZS1 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
FOXP3Q9BZS1 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms