Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
UPF3BQ9BZI7 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC21.57■■□□□ 1.04
UPF3BQ9BZI7 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
UPF3BQ9BZI7 AC106820.2-201ENST00000563775 3264 ntBASIC21.57■■□□□ 1.04
UPF3BQ9BZI7 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
UPF3BQ9BZI7 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
UPF3BQ9BZI7 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
UPF3BQ9BZI7 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
UPF3BQ9BZI7 AC006116.8-202ENST00000587620 1550 ntBASIC21.57■■□□□ 1.04
UPF3BQ9BZI7 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
UPF3BQ9BZI7 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
UPF3BQ9BZI7 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
UPF3BQ9BZI7 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
UPF3BQ9BZI7 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
UPF3BQ9BZI7 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
UPF3BQ9BZI7 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
UPF3BQ9BZI7 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
UPF3BQ9BZI7 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
UPF3BQ9BZI7 AC100803.2-201ENST00000562459 1963 ntBASIC21.56■■□□□ 1.04
UPF3BQ9BZI7 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
UPF3BQ9BZI7 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC21.56■■□□□ 1.04
UPF3BQ9BZI7 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC21.56■■□□□ 1.04
UPF3BQ9BZI7 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
UPF3BQ9BZI7 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC21.56■■□□□ 1.04
UPF3BQ9BZI7 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC21.56■■□□□ 1.04
UPF3BQ9BZI7 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC21.56■■□□□ 1.04
UPF3BQ9BZI7 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
UPF3BQ9BZI7 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
UPF3BQ9BZI7 DUT-205ENST00000558813 769 ntTSL 2 BASIC21.56■■□□□ 1.04
UPF3BQ9BZI7 MIR3917-201ENST00000580971 93 ntBASIC21.56■■□□□ 1.04
UPF3BQ9BZI7 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC21.56■■□□□ 1.04
UPF3BQ9BZI7 AL157888.1-201ENST00000631930 593 ntBASIC21.56■■□□□ 1.04
UPF3BQ9BZI7 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
UPF3BQ9BZI7 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
UPF3BQ9BZI7 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
UPF3BQ9BZI7 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
UPF3BQ9BZI7 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
UPF3BQ9BZI7 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
UPF3BQ9BZI7 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC21.56■■□□□ 1.04
UPF3BQ9BZI7 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
UPF3BQ9BZI7 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
UPF3BQ9BZI7 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
UPF3BQ9BZI7 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
UPF3BQ9BZI7 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC21.56■■□□□ 1.04
UPF3BQ9BZI7 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
UPF3BQ9BZI7 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
UPF3BQ9BZI7 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
UPF3BQ9BZI7 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC21.55■■□□□ 1.04
UPF3BQ9BZI7 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
UPF3BQ9BZI7 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC21.55■■□□□ 1.04
UPF3BQ9BZI7 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
UPF3BQ9BZI7 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
UPF3BQ9BZI7 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC21.55■■□□□ 1.04
UPF3BQ9BZI7 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC21.55■■□□□ 1.04
UPF3BQ9BZI7 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC21.55■■□□□ 1.04
UPF3BQ9BZI7 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
UPF3BQ9BZI7 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC21.55■■□□□ 1.04
UPF3BQ9BZI7 NEK4P2-201ENST00000580004 1012 ntBASIC21.55■■□□□ 1.04
UPF3BQ9BZI7 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
UPF3BQ9BZI7 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
UPF3BQ9BZI7 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC21.55■■□□□ 1.04
UPF3BQ9BZI7 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC21.55■■□□□ 1.04
UPF3BQ9BZI7 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
UPF3BQ9BZI7 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
UPF3BQ9BZI7 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
UPF3BQ9BZI7 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
UPF3BQ9BZI7 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
UPF3BQ9BZI7 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC21.55■■□□□ 1.04
UPF3BQ9BZI7 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC21.54■■□□□ 1.04
UPF3BQ9BZI7 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
UPF3BQ9BZI7 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
UPF3BQ9BZI7 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
UPF3BQ9BZI7 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
UPF3BQ9BZI7 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
UPF3BQ9BZI7 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
UPF3BQ9BZI7 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
UPF3BQ9BZI7 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
UPF3BQ9BZI7 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
UPF3BQ9BZI7 PP12613-201ENST00000424958 2230 ntBASIC21.54■■□□□ 1.04
UPF3BQ9BZI7 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
UPF3BQ9BZI7 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC21.54■■□□□ 1.04
UPF3BQ9BZI7 MNT-208ENST00000575394 606 ntTSL 4 BASIC21.54■■□□□ 1.04
UPF3BQ9BZI7 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
UPF3BQ9BZI7 CLN6-221ENST00000637494 765 ntTSL 5 BASIC21.54■■□□□ 1.04
UPF3BQ9BZI7 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC21.54■■□□□ 1.04
UPF3BQ9BZI7 AC092865.7-201ENST00000641832 219 ntBASIC21.54■■□□□ 1.04
UPF3BQ9BZI7 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
UPF3BQ9BZI7 HCG11-201ENST00000411553 5696 ntBASIC21.54■■□□□ 1.04
UPF3BQ9BZI7 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
UPF3BQ9BZI7 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
UPF3BQ9BZI7 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
UPF3BQ9BZI7 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
UPF3BQ9BZI7 KRT18P55-202ENST00000578578 1546 ntBASIC21.54■■□□□ 1.04
UPF3BQ9BZI7 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
UPF3BQ9BZI7 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
UPF3BQ9BZI7 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
UPF3BQ9BZI7 NARF-204ENST00000390006 1766 ntTSL 2 BASIC21.53■■□□□ 1.04
UPF3BQ9BZI7 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
UPF3BQ9BZI7 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
UPF3BQ9BZI7 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms