Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CNTNAP3Q9BZ76 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CNTNAP3Q9BZ76 KRT89P-201ENST00000620027 1478 ntBASIC17.16■□□□□ 0.34
CNTNAP3Q9BZ76 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CNTNAP3Q9BZ76 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CNTNAP3Q9BZ76 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.15■□□□□ 0.34
CNTNAP3Q9BZ76 AC020907.5-201ENST00000624372 1936 ntBASIC17.15■□□□□ 0.34
CNTNAP3Q9BZ76 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CNTNAP3Q9BZ76 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNTNAP3Q9BZ76 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNTNAP3Q9BZ76 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNTNAP3Q9BZ76 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNTNAP3Q9BZ76 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNTNAP3Q9BZ76 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNTNAP3Q9BZ76 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.15■□□□□ 0.34
CNTNAP3Q9BZ76 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNTNAP3Q9BZ76 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CNTNAP3Q9BZ76 CRYGEP-201ENST00000412192 528 ntBASIC17.15■□□□□ 0.34
CNTNAP3Q9BZ76 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CNTNAP3Q9BZ76 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.15■□□□□ 0.34
CNTNAP3Q9BZ76 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.15■□□□□ 0.34
CNTNAP3Q9BZ76 LINC00628-201ENST00000628516 1289 ntBASIC17.15■□□□□ 0.34
CNTNAP3Q9BZ76 AL358472.5-202ENST00000641448 1267 ntBASIC17.15■□□□□ 0.34
CNTNAP3Q9BZ76 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CNTNAP3Q9BZ76 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNTNAP3Q9BZ76 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.15■□□□□ 0.34
CNTNAP3Q9BZ76 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNTNAP3Q9BZ76 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNTNAP3Q9BZ76 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNTNAP3Q9BZ76 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CNTNAP3Q9BZ76 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNTNAP3Q9BZ76 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CNTNAP3Q9BZ76 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNTNAP3Q9BZ76 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CNTNAP3Q9BZ76 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNTNAP3Q9BZ76 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
CNTNAP3Q9BZ76 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CNTNAP3Q9BZ76 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.14■□□□□ 0.33
CNTNAP3Q9BZ76 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CNTNAP3Q9BZ76 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNTNAP3Q9BZ76 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.14■□□□□ 0.33
CNTNAP3Q9BZ76 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNTNAP3Q9BZ76 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNTNAP3Q9BZ76 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CNTNAP3Q9BZ76 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC17.14■□□□□ 0.33
CNTNAP3Q9BZ76 ARSEP1-201ENST00000420443 635 ntBASIC17.14■□□□□ 0.33
CNTNAP3Q9BZ76 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC17.14■□□□□ 0.33
CNTNAP3Q9BZ76 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.14■□□□□ 0.33
CNTNAP3Q9BZ76 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC17.14■□□□□ 0.33
CNTNAP3Q9BZ76 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.14■□□□□ 0.33
CNTNAP3Q9BZ76 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CNTNAP3Q9BZ76 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.14■□□□□ 0.33
CNTNAP3Q9BZ76 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.14■□□□□ 0.33
CNTNAP3Q9BZ76 NOP2-211ENST00000540228 668 ntTSL 2 BASIC17.14■□□□□ 0.33
CNTNAP3Q9BZ76 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNTNAP3Q9BZ76 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNTNAP3Q9BZ76 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNTNAP3Q9BZ76 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNTNAP3Q9BZ76 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC17.14■□□□□ 0.33
CNTNAP3Q9BZ76 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.14■□□□□ 0.33
CNTNAP3Q9BZ76 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CNTNAP3Q9BZ76 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNTNAP3Q9BZ76 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNTNAP3Q9BZ76 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNTNAP3Q9BZ76 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.13■□□□□ 0.33
CNTNAP3Q9BZ76 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.13■□□□□ 0.33
CNTNAP3Q9BZ76 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNTNAP3Q9BZ76 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.13■□□□□ 0.33
CNTNAP3Q9BZ76 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.13■□□□□ 0.33
CNTNAP3Q9BZ76 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNTNAP3Q9BZ76 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNTNAP3Q9BZ76 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CNTNAP3Q9BZ76 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC17.13■□□□□ 0.33
CNTNAP3Q9BZ76 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CNTNAP3Q9BZ76 BASP1P1-201ENST00000430708 665 ntBASIC17.13■□□□□ 0.33
CNTNAP3Q9BZ76 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CNTNAP3Q9BZ76 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.13■□□□□ 0.33
CNTNAP3Q9BZ76 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.13■□□□□ 0.33
CNTNAP3Q9BZ76 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CNTNAP3Q9BZ76 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CNTNAP3Q9BZ76 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.13■□□□□ 0.33
CNTNAP3Q9BZ76 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CNTNAP3Q9BZ76 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CNTNAP3Q9BZ76 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CNTNAP3Q9BZ76 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNTNAP3Q9BZ76 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.13■□□□□ 0.33
CNTNAP3Q9BZ76 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CNTNAP3Q9BZ76 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CNTNAP3Q9BZ76 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CNTNAP3Q9BZ76 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CNTNAP3Q9BZ76 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNTNAP3Q9BZ76 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CNTNAP3Q9BZ76 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.12■□□□□ 0.33
CNTNAP3Q9BZ76 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.12■□□□□ 0.33
CNTNAP3Q9BZ76 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.12■□□□□ 0.33
CNTNAP3Q9BZ76 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CNTNAP3Q9BZ76 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
CNTNAP3Q9BZ76 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.12■□□□□ 0.33
CNTNAP3Q9BZ76 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNTNAP3Q9BZ76 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms