Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
KRTAP3-3Q9BYR6 MIR639-201ENST00000384974 98 ntBASIC11.28□□□□□ -0.6
KRTAP3-3Q9BYR6 NPM1P32-201ENST00000412580 604 ntBASIC11.28□□□□□ -0.6
KRTAP3-3Q9BYR6 AL024507.1-201ENST00000412741 274 ntBASIC11.28□□□□□ -0.6
KRTAP3-3Q9BYR6 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC11.28□□□□□ -0.6
KRTAP3-3Q9BYR6 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC11.28□□□□□ -0.6
KRTAP3-3Q9BYR6 AC083873.1-201ENST00000421179 1099 ntBASIC11.28□□□□□ -0.6
KRTAP3-3Q9BYR6 AC004074.1-201ENST00000421810 1063 ntBASIC11.28□□□□□ -0.6
KRTAP3-3Q9BYR6 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC11.28□□□□□ -0.6
KRTAP3-3Q9BYR6 SLC8A1-AS1-206ENST00000439606 565 ntTSL 4 BASIC11.28□□□□□ -0.6
KRTAP3-3Q9BYR6 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC11.28□□□□□ -0.6
KRTAP3-3Q9BYR6 XKRYP6-201ENST00000440468 1116 ntBASIC11.28□□□□□ -0.6
KRTAP3-3Q9BYR6 XKRYP3-201ENST00000442113 1116 ntBASIC11.28□□□□□ -0.6
KRTAP3-3Q9BYR6 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
KRTAP3-3Q9BYR6 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC11.28□□□□□ -0.6
KRTAP3-3Q9BYR6 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC11.28□□□□□ -0.6
KRTAP3-3Q9BYR6 RNU2-30P-201ENST00000516209 141 ntBASIC11.28□□□□□ -0.6
KRTAP3-3Q9BYR6 HMGB1P1-201ENST00000522557 636 ntBASIC11.28□□□□□ -0.6
KRTAP3-3Q9BYR6 AP000893.2-201ENST00000527550 433 ntTSL 5 BASIC11.28□□□□□ -0.6
KRTAP3-3Q9BYR6 TRIM69-210ENST00000561043 1017 ntTSL 3 BASIC11.28□□□□□ -0.6
KRTAP3-3Q9BYR6 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC11.28□□□□□ -0.6
KRTAP3-3Q9BYR6 AC123912.1-201ENST00000594564 447 ntTSL 3 BASIC11.28□□□□□ -0.6
KRTAP3-3Q9BYR6 AC087468.1-201ENST00000604365 630 ntBASIC11.28□□□□□ -0.6
KRTAP3-3Q9BYR6 AC008277.2-201ENST00000605196 797 ntBASIC11.28□□□□□ -0.6
KRTAP3-3Q9BYR6 TRAM2-AS1-202ENST00000605910 1053 ntTSL 3 BASIC11.28□□□□□ -0.6
KRTAP3-3Q9BYR6 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC11.28□□□□□ -0.6
KRTAP3-3Q9BYR6 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
KRTAP3-3Q9BYR6 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
KRTAP3-3Q9BYR6 EI24-213ENST00000618552 1747 ntTSL 5 BASIC11.28□□□□□ -0.6
KRTAP3-3Q9BYR6 GPM6A-221ENST00000515090 1500 ntTSL 2 BASIC11.28□□□□□ -0.6
KRTAP3-3Q9BYR6 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
KRTAP3-3Q9BYR6 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
KRTAP3-3Q9BYR6 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
KRTAP3-3Q9BYR6 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
KRTAP3-3Q9BYR6 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
KRTAP3-3Q9BYR6 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
KRTAP3-3Q9BYR6 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC11.27□□□□□ -0.6
KRTAP3-3Q9BYR6 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
KRTAP3-3Q9BYR6 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
KRTAP3-3Q9BYR6 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
KRTAP3-3Q9BYR6 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
KRTAP3-3Q9BYR6 ANGPT2-202ENST00000338312 1466 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
KRTAP3-3Q9BYR6 AMZ2-205ENST00000577866 1492 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
KRTAP3-3Q9BYR6 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
KRTAP3-3Q9BYR6 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
KRTAP3-3Q9BYR6 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
KRTAP3-3Q9BYR6 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
KRTAP3-3Q9BYR6 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
KRTAP3-3Q9BYR6 DUSP8P3-201ENST00000399571 1760 ntBASIC11.27□□□□□ -0.61
KRTAP3-3Q9BYR6 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
KRTAP3-3Q9BYR6 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
KRTAP3-3Q9BYR6 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
KRTAP3-3Q9BYR6 PAGE4-201ENST00000218068 499 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
KRTAP3-3Q9BYR6 UGT3A1-202ENST00000333811 1114 ntTSL 5 BASIC11.27□□□□□ -0.61
KRTAP3-3Q9BYR6 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
KRTAP3-3Q9BYR6 PAGE4-202ENST00000376141 487 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
KRTAP3-3Q9BYR6 PPP1R2P9-201ENST00000378131 880 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
KRTAP3-3Q9BYR6 AC022400.5-201ENST00000415917 1031 ntTSL 3 BASIC11.27□□□□□ -0.61
KRTAP3-3Q9BYR6 RPL6P21-201ENST00000418672 846 ntBASIC11.27□□□□□ -0.61
KRTAP3-3Q9BYR6 AL136231.1-201ENST00000429407 730 ntBASIC11.27□□□□□ -0.61
KRTAP3-3Q9BYR6 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
KRTAP3-3Q9BYR6 MTND5P14-201ENST00000441481 1267 ntBASIC11.27□□□□□ -0.61
KRTAP3-3Q9BYR6 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC11.27□□□□□ -0.61
KRTAP3-3Q9BYR6 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
KRTAP3-3Q9BYR6 AL133406.2-201ENST00000452363 1198 ntTSL 2 BASIC11.27□□□□□ -0.61
KRTAP3-3Q9BYR6 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
KRTAP3-3Q9BYR6 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC11.27□□□□□ -0.61
KRTAP3-3Q9BYR6 AC080014.1-201ENST00000496877 1201 ntBASIC11.27□□□□□ -0.61
KRTAP3-3Q9BYR6 AC138853.1-201ENST00000503549 823 ntBASIC11.27□□□□□ -0.61
KRTAP3-3Q9BYR6 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC11.27□□□□□ -0.61
KRTAP3-3Q9BYR6 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC11.27□□□□□ -0.61
KRTAP3-3Q9BYR6 HMGB3P13-201ENST00000511263 607 ntBASIC11.27□□□□□ -0.61
KRTAP3-3Q9BYR6 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC11.27□□□□□ -0.61
KRTAP3-3Q9BYR6 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC11.27□□□□□ -0.61
KRTAP3-3Q9BYR6 AC010376.1-201ENST00000522101 334 ntBASIC11.27□□□□□ -0.61
KRTAP3-3Q9BYR6 RPS2-202ENST00000526522 924 ntTSL 2 BASIC11.27□□□□□ -0.61
KRTAP3-3Q9BYR6 DENND5B-AS1-202ENST00000537346 1106 ntTSL 3 BASIC11.27□□□□□ -0.61
KRTAP3-3Q9BYR6 AC074029.2-201ENST00000551045 634 ntBASIC11.27□□□□□ -0.61
KRTAP3-3Q9BYR6 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC11.27□□□□□ -0.61
KRTAP3-3Q9BYR6 LINC00907-207ENST00000591381 1291 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
KRTAP3-3Q9BYR6 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC11.27□□□□□ -0.61
KRTAP3-3Q9BYR6 AC136469.1-201ENST00000595706 511 ntTSL 5 BASIC11.27□□□□□ -0.61
KRTAP3-3Q9BYR6 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC11.27□□□□□ -0.61
KRTAP3-3Q9BYR6 AP000892.2-201ENST00000613535 324 ntBASIC11.27□□□□□ -0.61
KRTAP3-3Q9BYR6 AL583859.3-201ENST00000623982 1068 ntBASIC11.27□□□□□ -0.61
KRTAP3-3Q9BYR6 AC136603.1-201ENST00000625152 767 ntBASIC11.27□□□□□ -0.61
KRTAP3-3Q9BYR6 SOX2-OT-249ENST00000628810 618 ntTSL 5 BASIC11.27□□□□□ -0.61
KRTAP3-3Q9BYR6 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
KRTAP3-3Q9BYR6 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
KRTAP3-3Q9BYR6 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
KRTAP3-3Q9BYR6 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC11.27□□□□□ -0.61
KRTAP3-3Q9BYR6 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
KRTAP3-3Q9BYR6 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
KRTAP3-3Q9BYR6 EP400NL-214ENST00000641289 2402 ntBASIC11.27□□□□□ -0.61
KRTAP3-3Q9BYR6 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC11.27□□□□□ -0.61
KRTAP3-3Q9BYR6 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
KRTAP3-3Q9BYR6 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
KRTAP3-3Q9BYR6 ZNF559-211ENST00000592504 1398 ntTSL 2 BASIC11.27□□□□□ -0.61
KRTAP3-3Q9BYR6 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC11.27□□□□□ -0.61
KRTAP3-3Q9BYR6 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms