Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RTFDC1Q9BY42 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RTFDC1Q9BY42 ANO7L1-203ENST00000602586 1720 ntBASIC21.85■■□□□ 1.09
RTFDC1Q9BY42 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC21.85■■□□□ 1.09
RTFDC1Q9BY42 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC21.85■■□□□ 1.09
RTFDC1Q9BY42 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RTFDC1Q9BY42 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
RTFDC1Q9BY42 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
RTFDC1Q9BY42 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
RTFDC1Q9BY42 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
RTFDC1Q9BY42 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
RTFDC1Q9BY42 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
RTFDC1Q9BY42 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
RTFDC1Q9BY42 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC21.84■■□□□ 1.09
RTFDC1Q9BY42 AC005082.1-201ENST00000413042 2259 ntBASIC21.84■■□□□ 1.09
RTFDC1Q9BY42 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RTFDC1Q9BY42 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RTFDC1Q9BY42 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RTFDC1Q9BY42 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
RTFDC1Q9BY42 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC21.84■■□□□ 1.09
RTFDC1Q9BY42 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC21.84■■□□□ 1.09
RTFDC1Q9BY42 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC21.84■■□□□ 1.09
RTFDC1Q9BY42 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC21.84■■□□□ 1.09
RTFDC1Q9BY42 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RTFDC1Q9BY42 SDCCAG3P1-201ENST00000589292 1150 ntBASIC21.84■■□□□ 1.09
RTFDC1Q9BY42 COPE-211ENST00000600932 1144 ntTSL 5 BASIC21.84■■□□□ 1.09
RTFDC1Q9BY42 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC21.84■■□□□ 1.09
RTFDC1Q9BY42 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RTFDC1Q9BY42 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC21.84■■□□□ 1.09
RTFDC1Q9BY42 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC21.84■■□□□ 1.09
RTFDC1Q9BY42 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RTFDC1Q9BY42 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC21.83■■□□□ 1.09
RTFDC1Q9BY42 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.83■■□□□ 1.09
RTFDC1Q9BY42 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RTFDC1Q9BY42 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RTFDC1Q9BY42 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RTFDC1Q9BY42 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC21.83■■□□□ 1.09
RTFDC1Q9BY42 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RTFDC1Q9BY42 SPDYE21P-201ENST00000413323 827 ntBASIC21.83■■□□□ 1.09
RTFDC1Q9BY42 MCCD1P2-201ENST00000423228 335 ntBASIC21.83■■□□□ 1.09
RTFDC1Q9BY42 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC21.83■■□□□ 1.09
RTFDC1Q9BY42 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
RTFDC1Q9BY42 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC21.83■■□□□ 1.09
RTFDC1Q9BY42 COX5A-206ENST00000568783 571 ntTSL 3 BASIC21.83■■□□□ 1.09
RTFDC1Q9BY42 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC21.83■■□□□ 1.09
RTFDC1Q9BY42 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC21.83■■□□□ 1.09
RTFDC1Q9BY42 LINC02084-201ENST00000606069 1096 ntBASIC21.83■■□□□ 1.09
RTFDC1Q9BY42 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
RTFDC1Q9BY42 MIR1199-201ENST00000621445 119 ntBASIC21.83■■□□□ 1.09
RTFDC1Q9BY42 AC005593.1-201ENST00000624894 515 ntBASIC21.83■■□□□ 1.09
RTFDC1Q9BY42 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
RTFDC1Q9BY42 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC21.83■■□□□ 1.08
RTFDC1Q9BY42 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
RTFDC1Q9BY42 AC010460.3-201ENST00000511359 1579 ntBASIC21.82■■□□□ 1.08
RTFDC1Q9BY42 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC21.82■■□□□ 1.08
RTFDC1Q9BY42 AC022898.2-201ENST00000616822 1312 ntBASIC21.82■■□□□ 1.08
RTFDC1Q9BY42 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RTFDC1Q9BY42 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RTFDC1Q9BY42 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RTFDC1Q9BY42 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
RTFDC1Q9BY42 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
RTFDC1Q9BY42 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC21.82■■□□□ 1.08
RTFDC1Q9BY42 KRT18P2-201ENST00000447938 1258 ntBASIC21.82■■□□□ 1.08
RTFDC1Q9BY42 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
RTFDC1Q9BY42 AC136632.2-201ENST00000512891 861 ntBASIC21.82■■□□□ 1.08
RTFDC1Q9BY42 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC21.82■■□□□ 1.08
RTFDC1Q9BY42 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
RTFDC1Q9BY42 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RTFDC1Q9BY42 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC21.82■■□□□ 1.08
RTFDC1Q9BY42 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RTFDC1Q9BY42 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC21.81■■□□□ 1.08
RTFDC1Q9BY42 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC21.81■■□□□ 1.08
RTFDC1Q9BY42 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RTFDC1Q9BY42 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
RTFDC1Q9BY42 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RTFDC1Q9BY42 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC21.81■■□□□ 1.08
RTFDC1Q9BY42 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RTFDC1Q9BY42 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
RTFDC1Q9BY42 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RTFDC1Q9BY42 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC21.81■■□□□ 1.08
RTFDC1Q9BY42 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RTFDC1Q9BY42 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RTFDC1Q9BY42 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
RTFDC1Q9BY42 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC21.81■■□□□ 1.08
RTFDC1Q9BY42 AC108751.1-201ENST00000490852 363 ntBASIC21.81■■□□□ 1.08
RTFDC1Q9BY42 YBX1P5-201ENST00000509441 847 ntBASIC21.81■■□□□ 1.08
RTFDC1Q9BY42 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC21.81■■□□□ 1.08
RTFDC1Q9BY42 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC21.81■■□□□ 1.08
RTFDC1Q9BY42 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC21.81■■□□□ 1.08
RTFDC1Q9BY42 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RTFDC1Q9BY42 MED29-202ENST00000594368 1471 ntTSL 2 BASIC21.81■■□□□ 1.08
RTFDC1Q9BY42 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RTFDC1Q9BY42 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC21.8■■□□□ 1.08
RTFDC1Q9BY42 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RTFDC1Q9BY42 AC004817.3-201ENST00000602957 2129 ntBASIC21.8■■□□□ 1.08
RTFDC1Q9BY42 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RTFDC1Q9BY42 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RTFDC1Q9BY42 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC21.8■■□□□ 1.08
RTFDC1Q9BY42 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RTFDC1Q9BY42 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms