Protein–RNA interactions for Protein: Q9BY11

PACSIN1, Protein kinase C and casein kinase substrate in neurons protein 1, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1Q9BY11 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.22■□□□□ 0.67
PACSIN1Q9BY11 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PACSIN1Q9BY11 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PACSIN1Q9BY11 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PACSIN1Q9BY11 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PACSIN1Q9BY11 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PACSIN1Q9BY11 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PACSIN1Q9BY11 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
PACSIN1Q9BY11 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PACSIN1Q9BY11 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PACSIN1Q9BY11 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PACSIN1Q9BY11 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PACSIN1Q9BY11 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PACSIN1Q9BY11 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PACSIN1Q9BY11 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.22■□□□□ 0.67
PACSIN1Q9BY11 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.22■□□□□ 0.67
PACSIN1Q9BY11 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.22■□□□□ 0.67
PACSIN1Q9BY11 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.22■□□□□ 0.67
PACSIN1Q9BY11 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PACSIN1Q9BY11 FAM87A-204ENST00000613235 858 ntBASIC19.22■□□□□ 0.67
PACSIN1Q9BY11 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.22■□□□□ 0.67
PACSIN1Q9BY11 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC19.22■□□□□ 0.67
PACSIN1Q9BY11 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC19.22■□□□□ 0.67
PACSIN1Q9BY11 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.22■□□□□ 0.67
PACSIN1Q9BY11 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
PACSIN1Q9BY11 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
PACSIN1Q9BY11 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.22■□□□□ 0.67
PACSIN1Q9BY11 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.22■□□□□ 0.67
PACSIN1Q9BY11 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
PACSIN1Q9BY11 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.22■□□□□ 0.67
PACSIN1Q9BY11 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PACSIN1Q9BY11 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
PACSIN1Q9BY11 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.21■□□□□ 0.67
PACSIN1Q9BY11 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.21■□□□□ 0.67
PACSIN1Q9BY11 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PACSIN1Q9BY11 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
PACSIN1Q9BY11 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PACSIN1Q9BY11 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PACSIN1Q9BY11 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
PACSIN1Q9BY11 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
PACSIN1Q9BY11 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PACSIN1Q9BY11 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PACSIN1Q9BY11 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PACSIN1Q9BY11 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.21■□□□□ 0.67
PACSIN1Q9BY11 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PACSIN1Q9BY11 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
PACSIN1Q9BY11 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
PACSIN1Q9BY11 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PACSIN1Q9BY11 DUTP2-201ENST00000519164 463 ntBASIC19.21■□□□□ 0.67
PACSIN1Q9BY11 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PACSIN1Q9BY11 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PACSIN1Q9BY11 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
PACSIN1Q9BY11 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.21■□□□□ 0.67
PACSIN1Q9BY11 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.21■□□□□ 0.67
PACSIN1Q9BY11 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PACSIN1Q9BY11 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.21■□□□□ 0.67
PACSIN1Q9BY11 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PACSIN1Q9BY11 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PACSIN1Q9BY11 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PACSIN1Q9BY11 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PACSIN1Q9BY11 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC19.21■□□□□ 0.67
PACSIN1Q9BY11 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PACSIN1Q9BY11 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PACSIN1Q9BY11 AC099398.1-201ENST00000567919 2776 ntBASIC19.21■□□□□ 0.67
PACSIN1Q9BY11 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PACSIN1Q9BY11 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.21■□□□□ 0.67
PACSIN1Q9BY11 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC19.2■□□□□ 0.66
PACSIN1Q9BY11 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PACSIN1Q9BY11 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PACSIN1Q9BY11 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PACSIN1Q9BY11 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.2■□□□□ 0.66
PACSIN1Q9BY11 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PACSIN1Q9BY11 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PACSIN1Q9BY11 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PACSIN1Q9BY11 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.2■□□□□ 0.66
PACSIN1Q9BY11 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
PACSIN1Q9BY11 ECEL1P2-202ENST00000465689 757 ntBASIC19.2■□□□□ 0.66
PACSIN1Q9BY11 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PACSIN1Q9BY11 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
PACSIN1Q9BY11 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
PACSIN1Q9BY11 TMEM191A-211ENST00000637163 1067 ntBASIC19.2■□□□□ 0.66
PACSIN1Q9BY11 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
PACSIN1Q9BY11 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PACSIN1Q9BY11 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PACSIN1Q9BY11 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
PACSIN1Q9BY11 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PACSIN1Q9BY11 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PACSIN1Q9BY11 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PACSIN1Q9BY11 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
PACSIN1Q9BY11 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PACSIN1Q9BY11 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
PACSIN1Q9BY11 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PACSIN1Q9BY11 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.19■□□□□ 0.66
PACSIN1Q9BY11 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PACSIN1Q9BY11 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PACSIN1Q9BY11 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PACSIN1Q9BY11 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PACSIN1Q9BY11 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
PACSIN1Q9BY11 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PACSIN1Q9BY11 LINC00167-201ENST00000530583 1419 ntBASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms