Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC14□□□□□ -0.17
NDUFAF3Q9BU61 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14□□□□□ -0.17
NDUFAF3Q9BU61 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NDUFAF3Q9BU61 GNE-204ENST00000539208 2190 ntTSL 2 BASIC14□□□□□ -0.17
NDUFAF3Q9BU61 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
NDUFAF3Q9BU61 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NDUFAF3Q9BU61 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC14□□□□□ -0.17
NDUFAF3Q9BU61 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NDUFAF3Q9BU61 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC14□□□□□ -0.17
NDUFAF3Q9BU61 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NDUFAF3Q9BU61 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NDUFAF3Q9BU61 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NDUFAF3Q9BU61 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NDUFAF3Q9BU61 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NDUFAF3Q9BU61 TSPY26P-202ENST00000565928 3884 ntBASIC13.99□□□□□ -0.17
NDUFAF3Q9BU61 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC13.99□□□□□ -0.17
NDUFAF3Q9BU61 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NDUFAF3Q9BU61 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NDUFAF3Q9BU61 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC13.99□□□□□ -0.17
NDUFAF3Q9BU61 KRT17P2-201ENST00000300992 1314 ntBASIC13.99□□□□□ -0.17
NDUFAF3Q9BU61 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC13.99□□□□□ -0.17
NDUFAF3Q9BU61 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
NDUFAF3Q9BU61 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NDUFAF3Q9BU61 MDFI-202ENST00000373050 809 ntTSL 2 BASIC13.99□□□□□ -0.17
NDUFAF3Q9BU61 SERF2-207ENST00000409614 582 ntTSL 2 BASIC13.99□□□□□ -0.17
NDUFAF3Q9BU61 SNORA78-201ENST00000459373 127 ntBASIC13.99□□□□□ -0.17
NDUFAF3Q9BU61 HES2-206ENST00000489730 730 ntTSL 2 BASIC13.99□□□□□ -0.17
NDUFAF3Q9BU61 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC13.99□□□□□ -0.17
NDUFAF3Q9BU61 Z99916.2-201ENST00000604037 246 ntBASIC13.99□□□□□ -0.17
NDUFAF3Q9BU61 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NDUFAF3Q9BU61 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC13.99□□□□□ -0.17
NDUFAF3Q9BU61 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
NDUFAF3Q9BU61 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC13.99□□□□□ -0.17
NDUFAF3Q9BU61 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NDUFAF3Q9BU61 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NDUFAF3Q9BU61 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
NDUFAF3Q9BU61 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC13.99□□□□□ -0.17
NDUFAF3Q9BU61 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NDUFAF3Q9BU61 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NDUFAF3Q9BU61 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
NDUFAF3Q9BU61 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC13.99□□□□□ -0.17
NDUFAF3Q9BU61 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NDUFAF3Q9BU61 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NDUFAF3Q9BU61 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
NDUFAF3Q9BU61 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC13.98□□□□□ -0.17
NDUFAF3Q9BU61 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NDUFAF3Q9BU61 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NDUFAF3Q9BU61 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC13.98□□□□□ -0.17
NDUFAF3Q9BU61 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NDUFAF3Q9BU61 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NDUFAF3Q9BU61 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC13.98□□□□□ -0.17
NDUFAF3Q9BU61 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NDUFAF3Q9BU61 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC13.98□□□□□ -0.17
NDUFAF3Q9BU61 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.98□□□□□ -0.17
NDUFAF3Q9BU61 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
NDUFAF3Q9BU61 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NDUFAF3Q9BU61 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
NDUFAF3Q9BU61 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC13.98□□□□□ -0.17
NDUFAF3Q9BU61 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC13.98□□□□□ -0.17
NDUFAF3Q9BU61 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NDUFAF3Q9BU61 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NDUFAF3Q9BU61 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NDUFAF3Q9BU61 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
NDUFAF3Q9BU61 TREX2-204ENST00000370212 861 ntTSL 5 BASIC13.98□□□□□ -0.17
NDUFAF3Q9BU61 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
NDUFAF3Q9BU61 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
NDUFAF3Q9BU61 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
NDUFAF3Q9BU61 RPS2P55-201ENST00000397318 883 ntBASIC13.98□□□□□ -0.17
NDUFAF3Q9BU61 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
NDUFAF3Q9BU61 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NDUFAF3Q9BU61 AC107956.1-201ENST00000494359 873 ntBASIC13.98□□□□□ -0.17
NDUFAF3Q9BU61 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NDUFAF3Q9BU61 AC233702.5-201ENST00000584107 538 ntBASIC13.98□□□□□ -0.17
NDUFAF3Q9BU61 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC13.98□□□□□ -0.17
NDUFAF3Q9BU61 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC13.98□□□□□ -0.17
NDUFAF3Q9BU61 F11R-206ENST00000621309 4770 ntTSL 5 BASIC13.98□□□□□ -0.17
NDUFAF3Q9BU61 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC13.98□□□□□ -0.17
NDUFAF3Q9BU61 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NDUFAF3Q9BU61 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NDUFAF3Q9BU61 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NDUFAF3Q9BU61 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
NDUFAF3Q9BU61 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
NDUFAF3Q9BU61 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
NDUFAF3Q9BU61 LINC02199-201ENST00000506655 2702 ntBASIC13.98□□□□□ -0.17
NDUFAF3Q9BU61 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
NDUFAF3Q9BU61 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
NDUFAF3Q9BU61 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NDUFAF3Q9BU61 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NDUFAF3Q9BU61 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
NDUFAF3Q9BU61 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NDUFAF3Q9BU61 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NDUFAF3Q9BU61 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NDUFAF3Q9BU61 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NDUFAF3Q9BU61 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NDUFAF3Q9BU61 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC13.97□□□□□ -0.17
NDUFAF3Q9BU61 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NDUFAF3Q9BU61 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NDUFAF3Q9BU61 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NDUFAF3Q9BU61 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
NDUFAF3Q9BU61 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms