Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCM2Q9BSQ5 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCM2Q9BSQ5 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCM2Q9BSQ5 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCM2Q9BSQ5 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCM2Q9BSQ5 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCM2Q9BSQ5 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCM2Q9BSQ5 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CCM2Q9BSQ5 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CCM2Q9BSQ5 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCM2Q9BSQ5 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCM2Q9BSQ5 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCM2Q9BSQ5 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCM2Q9BSQ5 AC005332.8-201ENST00000622750 2735 ntBASIC17.76■□□□□ 0.43
CCM2Q9BSQ5 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCM2Q9BSQ5 UPK3BP1-201ENST00000428678 509 ntBASIC17.76■□□□□ 0.43
CCM2Q9BSQ5 KRT18P65-201ENST00000439811 1286 ntBASIC17.76■□□□□ 0.43
CCM2Q9BSQ5 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCM2Q9BSQ5 DUTP2-201ENST00000519164 463 ntBASIC17.76■□□□□ 0.43
CCM2Q9BSQ5 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.76■□□□□ 0.43
CCM2Q9BSQ5 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.76■□□□□ 0.43
CCM2Q9BSQ5 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.76■□□□□ 0.43
CCM2Q9BSQ5 AC009154.2-201ENST00000621177 724 ntBASIC17.76■□□□□ 0.43
CCM2Q9BSQ5 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.76■□□□□ 0.43
CCM2Q9BSQ5 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.76■□□□□ 0.43
CCM2Q9BSQ5 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.76■□□□□ 0.43
CCM2Q9BSQ5 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.76■□□□□ 0.43
CCM2Q9BSQ5 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
CCM2Q9BSQ5 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.76■□□□□ 0.43
CCM2Q9BSQ5 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.76■□□□□ 0.43
CCM2Q9BSQ5 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCM2Q9BSQ5 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCM2Q9BSQ5 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCM2Q9BSQ5 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCM2Q9BSQ5 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.76■□□□□ 0.43
CCM2Q9BSQ5 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCM2Q9BSQ5 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.76■□□□□ 0.43
CCM2Q9BSQ5 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CCM2Q9BSQ5 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
CCM2Q9BSQ5 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCM2Q9BSQ5 AL390961.4-201ENST00000623958 2535 ntBASIC17.75■□□□□ 0.43
CCM2Q9BSQ5 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCM2Q9BSQ5 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.75■□□□□ 0.43
CCM2Q9BSQ5 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCM2Q9BSQ5 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCM2Q9BSQ5 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCM2Q9BSQ5 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCM2Q9BSQ5 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCM2Q9BSQ5 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCM2Q9BSQ5 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCM2Q9BSQ5 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCM2Q9BSQ5 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCM2Q9BSQ5 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCM2Q9BSQ5 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCM2Q9BSQ5 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.75■□□□□ 0.43
CCM2Q9BSQ5 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.75■□□□□ 0.43
CCM2Q9BSQ5 GUSBP12-201ENST00000513727 720 ntBASIC17.75■□□□□ 0.43
CCM2Q9BSQ5 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.75■□□□□ 0.43
CCM2Q9BSQ5 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.75■□□□□ 0.43
CCM2Q9BSQ5 AC090616.6-201ENST00000582640 721 ntBASIC17.75■□□□□ 0.43
CCM2Q9BSQ5 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCM2Q9BSQ5 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCM2Q9BSQ5 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCM2Q9BSQ5 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.75■□□□□ 0.43
CCM2Q9BSQ5 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCM2Q9BSQ5 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCM2Q9BSQ5 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CCM2Q9BSQ5 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCM2Q9BSQ5 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.75■□□□□ 0.43
CCM2Q9BSQ5 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.75■□□□□ 0.43
CCM2Q9BSQ5 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCM2Q9BSQ5 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.75■□□□□ 0.43
CCM2Q9BSQ5 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.75■□□□□ 0.43
CCM2Q9BSQ5 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCM2Q9BSQ5 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCM2Q9BSQ5 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.75■□□□□ 0.43
CCM2Q9BSQ5 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.75■□□□□ 0.43
CCM2Q9BSQ5 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.75■□□□□ 0.43
CCM2Q9BSQ5 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCM2Q9BSQ5 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCM2Q9BSQ5 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CCM2Q9BSQ5 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCM2Q9BSQ5 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CCM2Q9BSQ5 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.74■□□□□ 0.43
CCM2Q9BSQ5 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCM2Q9BSQ5 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.74■□□□□ 0.43
CCM2Q9BSQ5 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCM2Q9BSQ5 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.74■□□□□ 0.43
CCM2Q9BSQ5 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.74■□□□□ 0.43
CCM2Q9BSQ5 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCM2Q9BSQ5 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.74■□□□□ 0.43
CCM2Q9BSQ5 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CCM2Q9BSQ5 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCM2Q9BSQ5 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.74■□□□□ 0.43
CCM2Q9BSQ5 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCM2Q9BSQ5 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCM2Q9BSQ5 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCM2Q9BSQ5 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CCM2Q9BSQ5 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCM2Q9BSQ5 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms