Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 IGHV3-65-201ENST00000523210 341 ntBASIC20.6■□□□□ 0.89
PTPN18Q99952 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC20.6■□□□□ 0.89
PTPN18Q99952 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PTPN18Q99952 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC20.6■□□□□ 0.89
PTPN18Q99952 MIR4751-201ENST00000578027 74 ntBASIC20.6■□□□□ 0.89
PTPN18Q99952 AC011467.4-201ENST00000594891 528 ntBASIC20.6■□□□□ 0.89
PTPN18Q99952 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC20.6■□□□□ 0.89
PTPN18Q99952 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC20.6■□□□□ 0.89
PTPN18Q99952 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC20.6■□□□□ 0.89
PTPN18Q99952 AC004790.2-201ENST00000623588 572 ntBASIC20.6■□□□□ 0.89
PTPN18Q99952 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.6■□□□□ 0.89
PTPN18Q99952 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
PTPN18Q99952 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PTPN18Q99952 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
PTPN18Q99952 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PTPN18Q99952 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.6■□□□□ 0.89
PTPN18Q99952 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
PTPN18Q99952 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTPN18Q99952 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
PTPN18Q99952 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTPN18Q99952 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.59■□□□□ 0.89
PTPN18Q99952 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTPN18Q99952 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
PTPN18Q99952 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTPN18Q99952 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTPN18Q99952 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC20.59■□□□□ 0.89
PTPN18Q99952 ARTN-206ENST00000472435 402 ntTSL 3 BASIC20.59■□□□□ 0.89
PTPN18Q99952 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC20.59■□□□□ 0.89
PTPN18Q99952 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC20.59■□□□□ 0.89
PTPN18Q99952 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC20.59■□□□□ 0.89
PTPN18Q99952 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC20.59■□□□□ 0.89
PTPN18Q99952 AC073592.5-201ENST00000624854 528 ntBASIC20.59■□□□□ 0.89
PTPN18Q99952 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTPN18Q99952 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTPN18Q99952 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC20.59■□□□□ 0.89
PTPN18Q99952 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.59■□□□□ 0.89
PTPN18Q99952 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.59■□□□□ 0.89
PTPN18Q99952 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTPN18Q99952 KRT8P47-201ENST00000604727 1398 ntBASIC20.59■□□□□ 0.89
PTPN18Q99952 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PTPN18Q99952 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
PTPN18Q99952 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PTPN18Q99952 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC20.58■□□□□ 0.89
PTPN18Q99952 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
PTPN18Q99952 IGLL3P-201ENST00000412472 434 ntBASIC20.58■□□□□ 0.89
PTPN18Q99952 PRSS29P-201ENST00000440800 595 ntBASIC20.58■□□□□ 0.89
PTPN18Q99952 COX20P2-201ENST00000452636 358 ntBASIC20.58■□□□□ 0.89
PTPN18Q99952 PUS1-205ENST00000535067 838 ntTSL 3 BASIC20.58■□□□□ 0.89
PTPN18Q99952 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC20.58■□□□□ 0.89
PTPN18Q99952 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC20.58■□□□□ 0.89
PTPN18Q99952 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PTPN18Q99952 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
PTPN18Q99952 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PTPN18Q99952 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PTPN18Q99952 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
PTPN18Q99952 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PTPN18Q99952 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PTPN18Q99952 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
PTPN18Q99952 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
PTPN18Q99952 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
PTPN18Q99952 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PTPN18Q99952 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PTPN18Q99952 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.57■□□□□ 0.88
PTPN18Q99952 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC20.57■□□□□ 0.88
PTPN18Q99952 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PTPN18Q99952 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PTPN18Q99952 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC20.57■□□□□ 0.88
PTPN18Q99952 ATP6V0CP3-201ENST00000417255 467 ntBASIC20.57■□□□□ 0.88
PTPN18Q99952 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC20.57■□□□□ 0.88
PTPN18Q99952 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC20.57■□□□□ 0.88
PTPN18Q99952 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
PTPN18Q99952 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC20.57■□□□□ 0.88
PTPN18Q99952 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC20.57■□□□□ 0.88
PTPN18Q99952 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC20.57■□□□□ 0.88
PTPN18Q99952 AC008667.4-201ENST00000607370 168 ntBASIC20.57■□□□□ 0.88
PTPN18Q99952 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
PTPN18Q99952 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.57■□□□□ 0.88
PTPN18Q99952 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
PTPN18Q99952 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PTPN18Q99952 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
PTPN18Q99952 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PTPN18Q99952 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
PTPN18Q99952 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTPN18Q99952 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC20.56■□□□□ 0.88
PTPN18Q99952 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
PTPN18Q99952 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
PTPN18Q99952 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTPN18Q99952 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PTPN18Q99952 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.56■□□□□ 0.88
PTPN18Q99952 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
PTPN18Q99952 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.56■□□□□ 0.88
PTPN18Q99952 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTPN18Q99952 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
PTPN18Q99952 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTPN18Q99952 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC20.56■□□□□ 0.88
PTPN18Q99952 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC20.56■□□□□ 0.88
PTPN18Q99952 BCRP1-201ENST00000444246 691 ntBASIC20.56■□□□□ 0.88
PTPN18Q99952 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTPN18Q99952 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
PTPN18Q99952 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms