Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.59■□□□□ 0.57
RPRD1AQ96P16 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPRD1AQ96P16 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPRD1AQ96P16 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
RPRD1AQ96P16 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPRD1AQ96P16 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
RPRD1AQ96P16 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.59■□□□□ 0.57
RPRD1AQ96P16 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
RPRD1AQ96P16 KRT18P56-201ENST00000507275 550 ntBASIC18.59■□□□□ 0.57
RPRD1AQ96P16 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
RPRD1AQ96P16 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.59■□□□□ 0.57
RPRD1AQ96P16 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPRD1AQ96P16 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPRD1AQ96P16 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.59■□□□□ 0.57
RPRD1AQ96P16 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.59■□□□□ 0.57
RPRD1AQ96P16 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.59■□□□□ 0.57
RPRD1AQ96P16 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPRD1AQ96P16 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.59■□□□□ 0.57
RPRD1AQ96P16 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPRD1AQ96P16 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RPRD1AQ96P16 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
RPRD1AQ96P16 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPRD1AQ96P16 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RPRD1AQ96P16 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.59■□□□□ 0.57
RPRD1AQ96P16 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
RPRD1AQ96P16 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPRD1AQ96P16 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPRD1AQ96P16 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.59■□□□□ 0.57
RPRD1AQ96P16 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.58■□□□□ 0.57
RPRD1AQ96P16 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RPRD1AQ96P16 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RPRD1AQ96P16 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
RPRD1AQ96P16 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RPRD1AQ96P16 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
RPRD1AQ96P16 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RPRD1AQ96P16 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.57
RPRD1AQ96P16 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RPRD1AQ96P16 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.58■□□□□ 0.57
RPRD1AQ96P16 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.58■□□□□ 0.57
RPRD1AQ96P16 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RPRD1AQ96P16 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RPRD1AQ96P16 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RPRD1AQ96P16 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.58■□□□□ 0.56
RPRD1AQ96P16 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.58■□□□□ 0.56
RPRD1AQ96P16 AC068472.1-201ENST00000474589 881 ntBASIC18.58■□□□□ 0.56
RPRD1AQ96P16 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.58■□□□□ 0.56
RPRD1AQ96P16 AP000867.3-201ENST00000524675 377 ntBASIC18.58■□□□□ 0.56
RPRD1AQ96P16 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.58■□□□□ 0.56
RPRD1AQ96P16 AC011840.4-201ENST00000578471 627 ntBASIC18.58■□□□□ 0.56
RPRD1AQ96P16 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.58■□□□□ 0.56
RPRD1AQ96P16 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.58■□□□□ 0.56
RPRD1AQ96P16 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RPRD1AQ96P16 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
RPRD1AQ96P16 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RPRD1AQ96P16 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RPRD1AQ96P16 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RPRD1AQ96P16 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.58■□□□□ 0.56
RPRD1AQ96P16 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
RPRD1AQ96P16 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
RPRD1AQ96P16 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RPRD1AQ96P16 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RPRD1AQ96P16 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RPRD1AQ96P16 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RPRD1AQ96P16 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
RPRD1AQ96P16 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RPRD1AQ96P16 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RPRD1AQ96P16 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RPRD1AQ96P16 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RPRD1AQ96P16 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RPRD1AQ96P16 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
RPRD1AQ96P16 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
RPRD1AQ96P16 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RPRD1AQ96P16 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RPRD1AQ96P16 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RPRD1AQ96P16 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.57■□□□□ 0.56
RPRD1AQ96P16 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.57■□□□□ 0.56
RPRD1AQ96P16 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
RPRD1AQ96P16 VENTXP7-201ENST00000475503 772 ntBASIC18.57■□□□□ 0.56
RPRD1AQ96P16 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RPRD1AQ96P16 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RPRD1AQ96P16 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.57■□□□□ 0.56
RPRD1AQ96P16 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.57■□□□□ 0.56
RPRD1AQ96P16 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
RPRD1AQ96P16 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RPRD1AQ96P16 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.57■□□□□ 0.56
RPRD1AQ96P16 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.57■□□□□ 0.56
RPRD1AQ96P16 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
RPRD1AQ96P16 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.57■□□□□ 0.56
RPRD1AQ96P16 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.56■□□□□ 0.56
RPRD1AQ96P16 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RPRD1AQ96P16 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RPRD1AQ96P16 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.56■□□□□ 0.56
RPRD1AQ96P16 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
RPRD1AQ96P16 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RPRD1AQ96P16 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RPRD1AQ96P16 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RPRD1AQ96P16 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RPRD1AQ96P16 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RPRD1AQ96P16 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RPRD1AQ96P16 MTCL1P1-201ENST00000446207 792 ntBASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms