Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.62■□□□□ 0.57
C9orf72Q96LT7 EGLN1P1-201ENST00000531623 762 ntBASIC18.62■□□□□ 0.57
C9orf72Q96LT7 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
C9orf72Q96LT7 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
C9orf72Q96LT7 AC006116.8-202ENST00000587620 1550 ntBASIC18.62■□□□□ 0.57
C9orf72Q96LT7 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
C9orf72Q96LT7 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
C9orf72Q96LT7 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
C9orf72Q96LT7 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
C9orf72Q96LT7 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.62■□□□□ 0.57
C9orf72Q96LT7 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.62■□□□□ 0.57
C9orf72Q96LT7 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.62■□□□□ 0.57
C9orf72Q96LT7 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.62■□□□□ 0.57
C9orf72Q96LT7 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
C9orf72Q96LT7 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
C9orf72Q96LT7 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
C9orf72Q96LT7 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
C9orf72Q96LT7 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
C9orf72Q96LT7 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.61■□□□□ 0.57
C9orf72Q96LT7 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.61■□□□□ 0.57
C9orf72Q96LT7 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
C9orf72Q96LT7 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
C9orf72Q96LT7 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
C9orf72Q96LT7 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.61■□□□□ 0.57
C9orf72Q96LT7 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.61■□□□□ 0.57
C9orf72Q96LT7 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
C9orf72Q96LT7 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
C9orf72Q96LT7 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
C9orf72Q96LT7 TSPY14P-201ENST00000303979 915 ntBASIC18.61■□□□□ 0.57
C9orf72Q96LT7 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
C9orf72Q96LT7 SLC25A3P1-201ENST00000443844 931 ntBASIC18.61■□□□□ 0.57
C9orf72Q96LT7 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.61■□□□□ 0.57
C9orf72Q96LT7 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.61■□□□□ 0.57
C9orf72Q96LT7 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
C9orf72Q96LT7 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
C9orf72Q96LT7 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.61■□□□□ 0.57
C9orf72Q96LT7 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
C9orf72Q96LT7 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
C9orf72Q96LT7 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
C9orf72Q96LT7 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
C9orf72Q96LT7 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
C9orf72Q96LT7 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
C9orf72Q96LT7 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
C9orf72Q96LT7 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
C9orf72Q96LT7 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.6■□□□□ 0.57
C9orf72Q96LT7 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.6■□□□□ 0.57
C9orf72Q96LT7 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.6■□□□□ 0.57
C9orf72Q96LT7 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
C9orf72Q96LT7 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
C9orf72Q96LT7 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
C9orf72Q96LT7 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
C9orf72Q96LT7 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
C9orf72Q96LT7 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
C9orf72Q96LT7 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
C9orf72Q96LT7 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.6■□□□□ 0.57
C9orf72Q96LT7 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.6■□□□□ 0.57
C9orf72Q96LT7 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
C9orf72Q96LT7 AC141586.5-201ENST00000624546 2050 ntBASIC18.6■□□□□ 0.57
C9orf72Q96LT7 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
C9orf72Q96LT7 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
C9orf72Q96LT7 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.6■□□□□ 0.57
C9orf72Q96LT7 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.6■□□□□ 0.57
C9orf72Q96LT7 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
C9orf72Q96LT7 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
C9orf72Q96LT7 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.59■□□□□ 0.57
C9orf72Q96LT7 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
C9orf72Q96LT7 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
C9orf72Q96LT7 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
C9orf72Q96LT7 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.59■□□□□ 0.57
C9orf72Q96LT7 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.59■□□□□ 0.57
C9orf72Q96LT7 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
C9orf72Q96LT7 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
C9orf72Q96LT7 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.59■□□□□ 0.57
C9orf72Q96LT7 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
C9orf72Q96LT7 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
C9orf72Q96LT7 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
C9orf72Q96LT7 AC096733.2-201ENST00000609937 1394 ntBASIC18.59■□□□□ 0.57
C9orf72Q96LT7 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
C9orf72Q96LT7 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
C9orf72Q96LT7 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
C9orf72Q96LT7 TERF1P1-201ENST00000311003 1181 ntBASIC18.59■□□□□ 0.57
C9orf72Q96LT7 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
C9orf72Q96LT7 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.59■□□□□ 0.57
C9orf72Q96LT7 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.59■□□□□ 0.57
C9orf72Q96LT7 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.59■□□□□ 0.57
C9orf72Q96LT7 AL137013.1-201ENST00000432946 1228 ntBASIC18.59■□□□□ 0.57
C9orf72Q96LT7 MFAP1P1-201ENST00000442257 1255 ntBASIC18.59■□□□□ 0.57
C9orf72Q96LT7 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.59■□□□□ 0.57
C9orf72Q96LT7 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.59■□□□□ 0.57
C9orf72Q96LT7 SIRPAP1-201ENST00000448467 1770 ntBASIC18.59■□□□□ 0.57
C9orf72Q96LT7 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
C9orf72Q96LT7 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
C9orf72Q96LT7 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
C9orf72Q96LT7 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
C9orf72Q96LT7 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
C9orf72Q96LT7 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
C9orf72Q96LT7 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
C9orf72Q96LT7 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
C9orf72Q96LT7 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
C9orf72Q96LT7 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms