Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CALR3Q96L12 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CALR3Q96L12 TSPY14P-201ENST00000303979 915 ntBASIC19.11■□□□□ 0.65
CALR3Q96L12 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.11■□□□□ 0.65
CALR3Q96L12 MIR718-201ENST00000390190 70 ntBASIC19.11■□□□□ 0.65
CALR3Q96L12 AL158047.1-201ENST00000445918 881 ntBASIC19.11■□□□□ 0.65
CALR3Q96L12 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CALR3Q96L12 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CALR3Q96L12 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.11■□□□□ 0.65
CALR3Q96L12 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.11■□□□□ 0.65
CALR3Q96L12 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.11■□□□□ 0.65
CALR3Q96L12 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.11■□□□□ 0.65
CALR3Q96L12 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CALR3Q96L12 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CALR3Q96L12 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CALR3Q96L12 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
CALR3Q96L12 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.11■□□□□ 0.65
CALR3Q96L12 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC19.11■□□□□ 0.65
CALR3Q96L12 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
CALR3Q96L12 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CALR3Q96L12 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CALR3Q96L12 PP12613-201ENST00000424958 2230 ntBASIC19.1■□□□□ 0.65
CALR3Q96L12 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
CALR3Q96L12 AL138688.1-201ENST00000624851 1594 ntBASIC19.1■□□□□ 0.65
CALR3Q96L12 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CALR3Q96L12 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.1■□□□□ 0.65
CALR3Q96L12 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CALR3Q96L12 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CALR3Q96L12 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CALR3Q96L12 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CALR3Q96L12 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CALR3Q96L12 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.1■□□□□ 0.65
CALR3Q96L12 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CALR3Q96L12 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CALR3Q96L12 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CALR3Q96L12 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.1■□□□□ 0.65
CALR3Q96L12 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.1■□□□□ 0.65
CALR3Q96L12 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.1■□□□□ 0.65
CALR3Q96L12 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.1■□□□□ 0.65
CALR3Q96L12 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.1■□□□□ 0.65
CALR3Q96L12 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CALR3Q96L12 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CALR3Q96L12 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CALR3Q96L12 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CALR3Q96L12 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CALR3Q96L12 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CALR3Q96L12 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CALR3Q96L12 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CALR3Q96L12 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.1■□□□□ 0.65
CALR3Q96L12 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CALR3Q96L12 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CALR3Q96L12 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CALR3Q96L12 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.09■□□□□ 0.65
CALR3Q96L12 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CALR3Q96L12 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.09■□□□□ 0.65
CALR3Q96L12 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CALR3Q96L12 OR6D1P-202ENST00000641007 5290 ntBASIC19.09■□□□□ 0.65
CALR3Q96L12 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CALR3Q96L12 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CALR3Q96L12 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CALR3Q96L12 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CALR3Q96L12 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.09■□□□□ 0.65
CALR3Q96L12 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CALR3Q96L12 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CALR3Q96L12 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CALR3Q96L12 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.09■□□□□ 0.65
CALR3Q96L12 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CALR3Q96L12 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CALR3Q96L12 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.09■□□□□ 0.65
CALR3Q96L12 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CALR3Q96L12 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.09■□□□□ 0.65
CALR3Q96L12 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.09■□□□□ 0.65
CALR3Q96L12 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CALR3Q96L12 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CALR3Q96L12 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CALR3Q96L12 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CALR3Q96L12 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.09■□□□□ 0.65
CALR3Q96L12 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.09■□□□□ 0.65
CALR3Q96L12 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CALR3Q96L12 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CALR3Q96L12 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CALR3Q96L12 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CALR3Q96L12 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC19.09■□□□□ 0.65
CALR3Q96L12 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.09■□□□□ 0.65
CALR3Q96L12 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CALR3Q96L12 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CALR3Q96L12 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CALR3Q96L12 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CALR3Q96L12 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
CALR3Q96L12 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
CALR3Q96L12 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.08■□□□□ 0.65
CALR3Q96L12 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CALR3Q96L12 AC133963.1-201ENST00000504166 1679 ntBASIC19.08■□□□□ 0.65
CALR3Q96L12 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CALR3Q96L12 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.08■□□□□ 0.65
CALR3Q96L12 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
CALR3Q96L12 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.08■□□□□ 0.65
CALR3Q96L12 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
CALR3Q96L12 AC099398.1-201ENST00000567919 2776 ntBASIC19.08■□□□□ 0.65
CALR3Q96L12 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms