Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RPGRIP1Q96KN7 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.92■□□□□ 0.78
RPGRIP1Q96KN7 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RPGRIP1Q96KN7 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.92■□□□□ 0.78
RPGRIP1Q96KN7 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
RPGRIP1Q96KN7 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.92■□□□□ 0.78
RPGRIP1Q96KN7 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RPGRIP1Q96KN7 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RPGRIP1Q96KN7 AP000593.1-201ENST00000393668 712 ntBASIC19.92■□□□□ 0.78
RPGRIP1Q96KN7 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RPGRIP1Q96KN7 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RPGRIP1Q96KN7 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.92■□□□□ 0.78
RPGRIP1Q96KN7 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RPGRIP1Q96KN7 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RPGRIP1Q96KN7 IFNL4P1-201ENST00000607083 540 ntBASIC19.92■□□□□ 0.78
RPGRIP1Q96KN7 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.92■□□□□ 0.78
RPGRIP1Q96KN7 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC19.92■□□□□ 0.78
RPGRIP1Q96KN7 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.92■□□□□ 0.78
RPGRIP1Q96KN7 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RPGRIP1Q96KN7 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RPGRIP1Q96KN7 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.92■□□□□ 0.78
RPGRIP1Q96KN7 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.92■□□□□ 0.78
RPGRIP1Q96KN7 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RPGRIP1Q96KN7 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RPGRIP1Q96KN7 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.91■□□□□ 0.78
RPGRIP1Q96KN7 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RPGRIP1Q96KN7 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
RPGRIP1Q96KN7 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RPGRIP1Q96KN7 SIRPAP1-201ENST00000448467 1770 ntBASIC19.91■□□□□ 0.78
RPGRIP1Q96KN7 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RPGRIP1Q96KN7 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RPGRIP1Q96KN7 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.91■□□□□ 0.78
RPGRIP1Q96KN7 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
RPGRIP1Q96KN7 EMBP1-201ENST00000458200 901 ntBASIC19.91■□□□□ 0.78
RPGRIP1Q96KN7 RASA4DP-201ENST00000460726 1199 ntBASIC19.91■□□□□ 0.78
RPGRIP1Q96KN7 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.91■□□□□ 0.78
RPGRIP1Q96KN7 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.91■□□□□ 0.78
RPGRIP1Q96KN7 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
RPGRIP1Q96KN7 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
RPGRIP1Q96KN7 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.91■□□□□ 0.78
RPGRIP1Q96KN7 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.91■□□□□ 0.78
RPGRIP1Q96KN7 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RPGRIP1Q96KN7 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
RPGRIP1Q96KN7 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
RPGRIP1Q96KN7 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RPGRIP1Q96KN7 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RPGRIP1Q96KN7 LINC00896-202ENST00000609602 2128 ntBASIC19.91■□□□□ 0.78
RPGRIP1Q96KN7 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RPGRIP1Q96KN7 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.91■□□□□ 0.78
RPGRIP1Q96KN7 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
RPGRIP1Q96KN7 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
RPGRIP1Q96KN7 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
RPGRIP1Q96KN7 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RPGRIP1Q96KN7 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
RPGRIP1Q96KN7 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RPGRIP1Q96KN7 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RPGRIP1Q96KN7 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RPGRIP1Q96KN7 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RPGRIP1Q96KN7 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RPGRIP1Q96KN7 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RPGRIP1Q96KN7 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RPGRIP1Q96KN7 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RPGRIP1Q96KN7 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RPGRIP1Q96KN7 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RPGRIP1Q96KN7 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.9■□□□□ 0.78
RPGRIP1Q96KN7 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.9■□□□□ 0.78
RPGRIP1Q96KN7 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.9■□□□□ 0.78
RPGRIP1Q96KN7 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RPGRIP1Q96KN7 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RPGRIP1Q96KN7 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RPGRIP1Q96KN7 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RPGRIP1Q96KN7 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RPGRIP1Q96KN7 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RPGRIP1Q96KN7 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RPGRIP1Q96KN7 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RPGRIP1Q96KN7 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RPGRIP1Q96KN7 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RPGRIP1Q96KN7 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RPGRIP1Q96KN7 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RPGRIP1Q96KN7 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RPGRIP1Q96KN7 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.9■□□□□ 0.78
RPGRIP1Q96KN7 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.9■□□□□ 0.78
RPGRIP1Q96KN7 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RPGRIP1Q96KN7 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
RPGRIP1Q96KN7 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
RPGRIP1Q96KN7 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
RPGRIP1Q96KN7 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
RPGRIP1Q96KN7 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RPGRIP1Q96KN7 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
RPGRIP1Q96KN7 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RPGRIP1Q96KN7 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
RPGRIP1Q96KN7 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.89■□□□□ 0.77
RPGRIP1Q96KN7 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RPGRIP1Q96KN7 KRT8P11-201ENST00000409686 1436 ntBASIC19.89■□□□□ 0.77
RPGRIP1Q96KN7 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RPGRIP1Q96KN7 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.89■□□□□ 0.77
RPGRIP1Q96KN7 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.89■□□□□ 0.77
RPGRIP1Q96KN7 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.89■□□□□ 0.77
RPGRIP1Q96KN7 AP002383.4-201ENST00000442518 975 ntBASIC19.89■□□□□ 0.77
RPGRIP1Q96KN7 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms