Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC18.16■□□□□ 0.5
SHDQ96IW2 ORC5-208ENST00000626700 344 ntTSL 3 BASIC18.16■□□□□ 0.5
SHDQ96IW2 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SHDQ96IW2 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SHDQ96IW2 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.16■□□□□ 0.5
SHDQ96IW2 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.16■□□□□ 0.5
SHDQ96IW2 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SHDQ96IW2 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SHDQ96IW2 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SHDQ96IW2 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SHDQ96IW2 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SHDQ96IW2 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SHDQ96IW2 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.15■□□□□ 0.5
SHDQ96IW2 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SHDQ96IW2 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SHDQ96IW2 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SHDQ96IW2 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.15■□□□□ 0.5
SHDQ96IW2 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.15■□□□□ 0.5
SHDQ96IW2 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.15■□□□□ 0.5
SHDQ96IW2 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SHDQ96IW2 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SHDQ96IW2 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SHDQ96IW2 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SHDQ96IW2 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SHDQ96IW2 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.15■□□□□ 0.5
SHDQ96IW2 FAM8A3P-201ENST00000427218 844 ntBASIC18.15■□□□□ 0.5
SHDQ96IW2 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SHDQ96IW2 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC18.15■□□□□ 0.5
SHDQ96IW2 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.15■□□□□ 0.5
SHDQ96IW2 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SHDQ96IW2 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
SHDQ96IW2 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC18.15■□□□□ 0.5
SHDQ96IW2 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SHDQ96IW2 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SHDQ96IW2 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.15■□□□□ 0.5
SHDQ96IW2 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
SHDQ96IW2 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SHDQ96IW2 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.5
SHDQ96IW2 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.14■□□□□ 0.5
SHDQ96IW2 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.14■□□□□ 0.5
SHDQ96IW2 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
SHDQ96IW2 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.14■□□□□ 0.49
SHDQ96IW2 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
SHDQ96IW2 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
SHDQ96IW2 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SHDQ96IW2 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.14■□□□□ 0.49
SHDQ96IW2 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SHDQ96IW2 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.14■□□□□ 0.49
SHDQ96IW2 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.14■□□□□ 0.49
SHDQ96IW2 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC18.14■□□□□ 0.49
SHDQ96IW2 SPDYE21P-201ENST00000413323 827 ntBASIC18.14■□□□□ 0.49
SHDQ96IW2 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SHDQ96IW2 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
SHDQ96IW2 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.14■□□□□ 0.49
SHDQ96IW2 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.14■□□□□ 0.49
SHDQ96IW2 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.14■□□□□ 0.49
SHDQ96IW2 AC011467.4-201ENST00000594891 528 ntBASIC18.14■□□□□ 0.49
SHDQ96IW2 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.14■□□□□ 0.49
SHDQ96IW2 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
SHDQ96IW2 AD001527.2-201ENST00000622994 785 ntBASIC18.14■□□□□ 0.49
SHDQ96IW2 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC18.14■□□□□ 0.49
SHDQ96IW2 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.14■□□□□ 0.49
SHDQ96IW2 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SHDQ96IW2 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SHDQ96IW2 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SHDQ96IW2 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SHDQ96IW2 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SHDQ96IW2 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SHDQ96IW2 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
SHDQ96IW2 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.13■□□□□ 0.49
SHDQ96IW2 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC18.13■□□□□ 0.49
SHDQ96IW2 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SHDQ96IW2 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.13■□□□□ 0.49
SHDQ96IW2 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SHDQ96IW2 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SHDQ96IW2 SYS1-203ENST00000414310 795 ntTSL 3 BASIC18.13■□□□□ 0.49
SHDQ96IW2 AC096633.1-201ENST00000422446 749 ntBASIC18.13■□□□□ 0.49
SHDQ96IW2 VN2R19P-201ENST00000442399 1052 ntBASIC18.13■□□□□ 0.49
SHDQ96IW2 ALG1L5P-201ENST00000482043 771 ntBASIC18.13■□□□□ 0.49
SHDQ96IW2 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.13■□□□□ 0.49
SHDQ96IW2 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC18.13■□□□□ 0.49
SHDQ96IW2 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC18.13■□□□□ 0.49
SHDQ96IW2 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC18.13■□□□□ 0.49
SHDQ96IW2 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
SHDQ96IW2 MIR4751-201ENST00000578027 74 ntBASIC18.13■□□□□ 0.49
SHDQ96IW2 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.13■□□□□ 0.49
SHDQ96IW2 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC18.13■□□□□ 0.49
SHDQ96IW2 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SHDQ96IW2 KRT8P47-201ENST00000604727 1398 ntBASIC18.13■□□□□ 0.49
SHDQ96IW2 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHDQ96IW2 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHDQ96IW2 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SHDQ96IW2 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SHDQ96IW2 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.13■□□□□ 0.49
SHDQ96IW2 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHDQ96IW2 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.13■□□□□ 0.49
SHDQ96IW2 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHDQ96IW2 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
SHDQ96IW2 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.12■□□□□ 0.49
SHDQ96IW2 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms