Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC46Q96FV0 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC46Q96FV0 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
LRRC46Q96FV0 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC46Q96FV0 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC46Q96FV0 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC46Q96FV0 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
LRRC46Q96FV0 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC46Q96FV0 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC46Q96FV0 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC46Q96FV0 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC46Q96FV0 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC46Q96FV0 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC46Q96FV0 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC46Q96FV0 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.29■□□□□ 0.2
LRRC46Q96FV0 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC46Q96FV0 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
LRRC46Q96FV0 GUSBP12-201ENST00000513727 720 ntBASIC16.29■□□□□ 0.2
LRRC46Q96FV0 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC46Q96FV0 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.29■□□□□ 0.2
LRRC46Q96FV0 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC46Q96FV0 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.29■□□□□ 0.2
LRRC46Q96FV0 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.29■□□□□ 0.2
LRRC46Q96FV0 AC091304.2-201ENST00000564639 760 ntBASIC16.29■□□□□ 0.2
LRRC46Q96FV0 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC46Q96FV0 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.29■□□□□ 0.2
LRRC46Q96FV0 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.29■□□□□ 0.2
LRRC46Q96FV0 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC46Q96FV0 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.29■□□□□ 0.2
LRRC46Q96FV0 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC46Q96FV0 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
LRRC46Q96FV0 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC46Q96FV0 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC46Q96FV0 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC46Q96FV0 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC46Q96FV0 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC46Q96FV0 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16.28■□□□□ 0.2
LRRC46Q96FV0 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC46Q96FV0 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.28■□□□□ 0.2
LRRC46Q96FV0 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC46Q96FV0 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.28■□□□□ 0.2
LRRC46Q96FV0 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC46Q96FV0 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC46Q96FV0 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC46Q96FV0 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC46Q96FV0 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC46Q96FV0 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC46Q96FV0 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.28■□□□□ 0.2
LRRC46Q96FV0 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.28■□□□□ 0.2
LRRC46Q96FV0 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.28■□□□□ 0.2
LRRC46Q96FV0 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.28■□□□□ 0.2
LRRC46Q96FV0 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.28■□□□□ 0.2
LRRC46Q96FV0 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
LRRC46Q96FV0 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.28■□□□□ 0.2
LRRC46Q96FV0 MIR3180-1-201ENST00000580374 94 ntBASIC16.28■□□□□ 0.2
LRRC46Q96FV0 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.28■□□□□ 0.2
LRRC46Q96FV0 MIR3180-3-201ENST00000584616 94 ntBASIC16.28■□□□□ 0.2
LRRC46Q96FV0 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.28■□□□□ 0.2
LRRC46Q96FV0 AC008687.5-201ENST00000593746 558 ntBASIC16.28■□□□□ 0.2
LRRC46Q96FV0 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC46Q96FV0 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.28■□□□□ 0.2
LRRC46Q96FV0 Z69720.1-201ENST00000601483 472 ntBASIC16.28■□□□□ 0.2
LRRC46Q96FV0 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.28■□□□□ 0.2
LRRC46Q96FV0 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.28■□□□□ 0.2
LRRC46Q96FV0 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC46Q96FV0 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC46Q96FV0 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC46Q96FV0 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC46Q96FV0 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.28■□□□□ 0.2
LRRC46Q96FV0 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC16.28■□□□□ 0.2
LRRC46Q96FV0 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
LRRC46Q96FV0 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC46Q96FV0 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC46Q96FV0 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
LRRC46Q96FV0 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC46Q96FV0 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC46Q96FV0 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC46Q96FV0 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC46Q96FV0 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.28■□□□□ 0.2
LRRC46Q96FV0 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC46Q96FV0 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.28■□□□□ 0.2
LRRC46Q96FV0 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LRRC46Q96FV0 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.27■□□□□ 0.2
LRRC46Q96FV0 Z83836.1-201ENST00000624605 1642 ntBASIC16.27■□□□□ 0.2
LRRC46Q96FV0 NFIC-211ENST00000641145 8399 ntBASIC16.27■□□□□ 0.2
LRRC46Q96FV0 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRRC46Q96FV0 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LRRC46Q96FV0 AC104581.1-202ENST00000635932 2618 ntBASIC16.27■□□□□ 0.2
LRRC46Q96FV0 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRRC46Q96FV0 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRRC46Q96FV0 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRRC46Q96FV0 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRRC46Q96FV0 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
LRRC46Q96FV0 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRRC46Q96FV0 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRRC46Q96FV0 AP002383.4-201ENST00000442518 975 ntBASIC16.27■□□□□ 0.2
LRRC46Q96FV0 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LRRC46Q96FV0 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.27■□□□□ 0.2
LRRC46Q96FV0 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.27■□□□□ 0.2
LRRC46Q96FV0 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms