Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.07■□□□□ 0.32
TM9SF4Q92544 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TM9SF4Q92544 MIR564-202ENST00000385049 94 ntBASIC17.07■□□□□ 0.32
TM9SF4Q92544 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TM9SF4Q92544 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.07■□□□□ 0.32
TM9SF4Q92544 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.07■□□□□ 0.32
TM9SF4Q92544 AP003733.1-201ENST00000491725 852 ntBASIC17.07■□□□□ 0.32
TM9SF4Q92544 AP000867.3-201ENST00000524675 377 ntBASIC17.07■□□□□ 0.32
TM9SF4Q92544 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TM9SF4Q92544 AC012615.1-201ENST00000565797 1299 ntBASIC17.07■□□□□ 0.32
TM9SF4Q92544 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TM9SF4Q92544 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.07■□□□□ 0.32
TM9SF4Q92544 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TM9SF4Q92544 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
TM9SF4Q92544 AC008556.1-201ENST00000610908 2040 ntBASIC17.07■□□□□ 0.32
TM9SF4Q92544 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TM9SF4Q92544 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TM9SF4Q92544 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TM9SF4Q92544 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TM9SF4Q92544 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
TM9SF4Q92544 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TM9SF4Q92544 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
TM9SF4Q92544 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TM9SF4Q92544 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.06■□□□□ 0.32
TM9SF4Q92544 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.06■□□□□ 0.32
TM9SF4Q92544 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.06■□□□□ 0.32
TM9SF4Q92544 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TM9SF4Q92544 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.06■□□□□ 0.32
TM9SF4Q92544 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TM9SF4Q92544 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TM9SF4Q92544 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TM9SF4Q92544 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TM9SF4Q92544 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TM9SF4Q92544 PVRIG2P-201ENST00000435460 978 ntBASIC17.06■□□□□ 0.32
TM9SF4Q92544 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.06■□□□□ 0.32
TM9SF4Q92544 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.06■□□□□ 0.32
TM9SF4Q92544 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TM9SF4Q92544 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.06■□□□□ 0.32
TM9SF4Q92544 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.06■□□□□ 0.32
TM9SF4Q92544 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.06■□□□□ 0.32
TM9SF4Q92544 AC091304.2-201ENST00000564639 760 ntBASIC17.06■□□□□ 0.32
TM9SF4Q92544 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.06■□□□□ 0.32
TM9SF4Q92544 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.06■□□□□ 0.32
TM9SF4Q92544 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TM9SF4Q92544 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.06■□□□□ 0.32
TM9SF4Q92544 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TM9SF4Q92544 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TM9SF4Q92544 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TM9SF4Q92544 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.06■□□□□ 0.32
TM9SF4Q92544 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TM9SF4Q92544 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.06■□□□□ 0.32
TM9SF4Q92544 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TM9SF4Q92544 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
TM9SF4Q92544 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TM9SF4Q92544 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TM9SF4Q92544 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
TM9SF4Q92544 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TM9SF4Q92544 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TM9SF4Q92544 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
TM9SF4Q92544 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.05■□□□□ 0.32
TM9SF4Q92544 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TM9SF4Q92544 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TM9SF4Q92544 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TM9SF4Q92544 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.05■□□□□ 0.32
TM9SF4Q92544 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TM9SF4Q92544 ANO7L1-203ENST00000602586 1720 ntBASIC17.05■□□□□ 0.32
TM9SF4Q92544 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TM9SF4Q92544 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TM9SF4Q92544 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.05■□□□□ 0.32
TM9SF4Q92544 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
TM9SF4Q92544 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
TM9SF4Q92544 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.05■□□□□ 0.32
TM9SF4Q92544 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TM9SF4Q92544 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TM9SF4Q92544 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.05■□□□□ 0.32
TM9SF4Q92544 KRT17P6-201ENST00000453795 1220 ntBASIC17.05■□□□□ 0.32
TM9SF4Q92544 AC104819.1-201ENST00000504587 486 ntBASIC17.05■□□□□ 0.32
TM9SF4Q92544 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.05■□□□□ 0.32
TM9SF4Q92544 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.05■□□□□ 0.32
TM9SF4Q92544 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.05■□□□□ 0.32
TM9SF4Q92544 IGHV3-41-201ENST00000613121 348 ntBASIC17.05■□□□□ 0.32
TM9SF4Q92544 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TM9SF4Q92544 Z83836.1-201ENST00000624605 1642 ntBASIC17.05■□□□□ 0.32
TM9SF4Q92544 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TM9SF4Q92544 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TM9SF4Q92544 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TM9SF4Q92544 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TM9SF4Q92544 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.05■□□□□ 0.32
TM9SF4Q92544 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.05■□□□□ 0.32
TM9SF4Q92544 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TM9SF4Q92544 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TM9SF4Q92544 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.05■□□□□ 0.32
TM9SF4Q92544 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TM9SF4Q92544 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TM9SF4Q92544 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.04■□□□□ 0.32
TM9SF4Q92544 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.04■□□□□ 0.32
TM9SF4Q92544 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.04■□□□□ 0.32
TM9SF4Q92544 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TM9SF4Q92544 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TM9SF4Q92544 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms