Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.11■□□□□ 0.49
SLC44A1Q8WWI5 AC022211.2-201ENST00000585075 2527 ntBASIC18.11■□□□□ 0.49
SLC44A1Q8WWI5 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC44A1Q8WWI5 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SLC44A1Q8WWI5 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC44A1Q8WWI5 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC44A1Q8WWI5 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
SLC44A1Q8WWI5 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC44A1Q8WWI5 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
SLC44A1Q8WWI5 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
SLC44A1Q8WWI5 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC44A1Q8WWI5 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SLC44A1Q8WWI5 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.1■□□□□ 0.49
SLC44A1Q8WWI5 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
SLC44A1Q8WWI5 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.1■□□□□ 0.49
SLC44A1Q8WWI5 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.1■□□□□ 0.49
SLC44A1Q8WWI5 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SLC44A1Q8WWI5 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.1■□□□□ 0.49
SLC44A1Q8WWI5 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.1■□□□□ 0.49
SLC44A1Q8WWI5 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.1■□□□□ 0.49
SLC44A1Q8WWI5 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC44A1Q8WWI5 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SLC44A1Q8WWI5 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SLC44A1Q8WWI5 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC44A1Q8WWI5 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC44A1Q8WWI5 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC44A1Q8WWI5 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
SLC44A1Q8WWI5 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.1■□□□□ 0.49
SLC44A1Q8WWI5 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SLC44A1Q8WWI5 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SLC44A1Q8WWI5 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.1■□□□□ 0.49
SLC44A1Q8WWI5 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.1■□□□□ 0.49
SLC44A1Q8WWI5 AC010240.3-201ENST00000607688 395 ntBASIC18.1■□□□□ 0.49
SLC44A1Q8WWI5 AC026471.5-201ENST00000615068 467 ntBASIC18.1■□□□□ 0.49
SLC44A1Q8WWI5 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC44A1Q8WWI5 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC44A1Q8WWI5 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC44A1Q8WWI5 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SLC44A1Q8WWI5 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC44A1Q8WWI5 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC44A1Q8WWI5 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SLC44A1Q8WWI5 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC44A1Q8WWI5 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
SLC44A1Q8WWI5 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
SLC44A1Q8WWI5 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC44A1Q8WWI5 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC44A1Q8WWI5 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SLC44A1Q8WWI5 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.09■□□□□ 0.49
SLC44A1Q8WWI5 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC44A1Q8WWI5 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.09■□□□□ 0.49
SLC44A1Q8WWI5 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC44A1Q8WWI5 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC44A1Q8WWI5 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC44A1Q8WWI5 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC44A1Q8WWI5 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SLC44A1Q8WWI5 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
SLC44A1Q8WWI5 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC44A1Q8WWI5 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SLC44A1Q8WWI5 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC44A1Q8WWI5 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SLC44A1Q8WWI5 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.09■□□□□ 0.49
SLC44A1Q8WWI5 AL158047.1-201ENST00000445918 881 ntBASIC18.09■□□□□ 0.49
SLC44A1Q8WWI5 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.09■□□□□ 0.49
SLC44A1Q8WWI5 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.09■□□□□ 0.49
SLC44A1Q8WWI5 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.09■□□□□ 0.49
SLC44A1Q8WWI5 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC44A1Q8WWI5 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SLC44A1Q8WWI5 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC44A1Q8WWI5 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.09■□□□□ 0.49
SLC44A1Q8WWI5 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.09■□□□□ 0.49
SLC44A1Q8WWI5 AC106820.2-201ENST00000563775 3264 ntBASIC18.09■□□□□ 0.49
SLC44A1Q8WWI5 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
SLC44A1Q8WWI5 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC44A1Q8WWI5 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
SLC44A1Q8WWI5 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SLC44A1Q8WWI5 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SLC44A1Q8WWI5 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SLC44A1Q8WWI5 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SLC44A1Q8WWI5 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SLC44A1Q8WWI5 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.08■□□□□ 0.49
SLC44A1Q8WWI5 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.49
SLC44A1Q8WWI5 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SLC44A1Q8WWI5 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.49
SLC44A1Q8WWI5 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.49
SLC44A1Q8WWI5 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SLC44A1Q8WWI5 LINC00304-203ENST00000565008 1864 ntBASIC18.08■□□□□ 0.49
SLC44A1Q8WWI5 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.08■□□□□ 0.48
SLC44A1Q8WWI5 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
SLC44A1Q8WWI5 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.08■□□□□ 0.48
SLC44A1Q8WWI5 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC44A1Q8WWI5 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC44A1Q8WWI5 GCSHP5-201ENST00000443090 522 ntBASIC18.08■□□□□ 0.48
SLC44A1Q8WWI5 UBE2SP1-201ENST00000450587 669 ntBASIC18.08■□□□□ 0.48
SLC44A1Q8WWI5 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
SLC44A1Q8WWI5 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC44A1Q8WWI5 BX088651.1-201ENST00000540551 451 ntBASIC18.08■□□□□ 0.48
SLC44A1Q8WWI5 AC142381.4-202ENST00000563973 229 ntBASIC18.08■□□□□ 0.48
SLC44A1Q8WWI5 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.08■□□□□ 0.48
SLC44A1Q8WWI5 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
SLC44A1Q8WWI5 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms