Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHKBP1Q8TBC3 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.94■□□□□ 0.62
SHKBP1Q8TBC3 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHKBP1Q8TBC3 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHKBP1Q8TBC3 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHKBP1Q8TBC3 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.94■□□□□ 0.62
SHKBP1Q8TBC3 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.94■□□□□ 0.62
SHKBP1Q8TBC3 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.94■□□□□ 0.62
SHKBP1Q8TBC3 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.94■□□□□ 0.62
SHKBP1Q8TBC3 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.94■□□□□ 0.62
SHKBP1Q8TBC3 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.94■□□□□ 0.62
SHKBP1Q8TBC3 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SHKBP1Q8TBC3 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.94■□□□□ 0.62
SHKBP1Q8TBC3 PCDHB18P-201ENST00000524813 2368 ntBASIC18.94■□□□□ 0.62
SHKBP1Q8TBC3 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHKBP1Q8TBC3 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHKBP1Q8TBC3 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SHKBP1Q8TBC3 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHKBP1Q8TBC3 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SHKBP1Q8TBC3 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SHKBP1Q8TBC3 AC120498.9-201ENST00000339021 3867 ntBASIC18.94■□□□□ 0.62
SHKBP1Q8TBC3 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHKBP1Q8TBC3 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.93■□□□□ 0.62
SHKBP1Q8TBC3 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHKBP1Q8TBC3 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHKBP1Q8TBC3 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.93■□□□□ 0.62
SHKBP1Q8TBC3 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
SHKBP1Q8TBC3 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SHKBP1Q8TBC3 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHKBP1Q8TBC3 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SHKBP1Q8TBC3 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHKBP1Q8TBC3 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHKBP1Q8TBC3 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHKBP1Q8TBC3 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHKBP1Q8TBC3 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.93■□□□□ 0.62
SHKBP1Q8TBC3 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHKBP1Q8TBC3 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
SHKBP1Q8TBC3 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.93■□□□□ 0.62
SHKBP1Q8TBC3 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.93■□□□□ 0.62
SHKBP1Q8TBC3 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHKBP1Q8TBC3 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHKBP1Q8TBC3 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.93■□□□□ 0.62
SHKBP1Q8TBC3 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SHKBP1Q8TBC3 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.93■□□□□ 0.62
SHKBP1Q8TBC3 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHKBP1Q8TBC3 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SHKBP1Q8TBC3 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHKBP1Q8TBC3 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SHKBP1Q8TBC3 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SHKBP1Q8TBC3 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHKBP1Q8TBC3 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHKBP1Q8TBC3 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.93■□□□□ 0.62
SHKBP1Q8TBC3 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHKBP1Q8TBC3 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHKBP1Q8TBC3 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHKBP1Q8TBC3 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SHKBP1Q8TBC3 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
SHKBP1Q8TBC3 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SHKBP1Q8TBC3 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
SHKBP1Q8TBC3 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
SHKBP1Q8TBC3 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
SHKBP1Q8TBC3 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SHKBP1Q8TBC3 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SHKBP1Q8TBC3 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SHKBP1Q8TBC3 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
SHKBP1Q8TBC3 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SHKBP1Q8TBC3 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SHKBP1Q8TBC3 RCN1P2-201ENST00000398357 915 ntBASIC18.92■□□□□ 0.62
SHKBP1Q8TBC3 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.92■□□□□ 0.62
SHKBP1Q8TBC3 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.92■□□□□ 0.62
SHKBP1Q8TBC3 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.92■□□□□ 0.62
SHKBP1Q8TBC3 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.92■□□□□ 0.62
SHKBP1Q8TBC3 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.92■□□□□ 0.62
SHKBP1Q8TBC3 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
SHKBP1Q8TBC3 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.92■□□□□ 0.62
SHKBP1Q8TBC3 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.92■□□□□ 0.62
SHKBP1Q8TBC3 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.92■□□□□ 0.62
SHKBP1Q8TBC3 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SHKBP1Q8TBC3 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SHKBP1Q8TBC3 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SHKBP1Q8TBC3 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.92■□□□□ 0.62
SHKBP1Q8TBC3 LINC01126-201ENST00000623515 1646 ntBASIC18.92■□□□□ 0.62
SHKBP1Q8TBC3 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.92■□□□□ 0.62
SHKBP1Q8TBC3 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SHKBP1Q8TBC3 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.91■□□□□ 0.62
SHKBP1Q8TBC3 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.91■□□□□ 0.62
SHKBP1Q8TBC3 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SHKBP1Q8TBC3 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SHKBP1Q8TBC3 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SHKBP1Q8TBC3 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SHKBP1Q8TBC3 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SHKBP1Q8TBC3 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SHKBP1Q8TBC3 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.91■□□□□ 0.62
SHKBP1Q8TBC3 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SHKBP1Q8TBC3 AC132008.2-207ENST00000454517 770 ntBASIC18.91■□□□□ 0.62
SHKBP1Q8TBC3 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.91■□□□□ 0.62
SHKBP1Q8TBC3 RNA5SP419-201ENST00000515908 135 ntBASIC18.91■□□□□ 0.62
SHKBP1Q8TBC3 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.91■□□□□ 0.62
SHKBP1Q8TBC3 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.91■□□□□ 0.62
SHKBP1Q8TBC3 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms