Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LMO3Q8TAP4 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LMO3Q8TAP4 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LMO3Q8TAP4 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.34■□□□□ 0.69
LMO3Q8TAP4 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LMO3Q8TAP4 FAM210CP-201ENST00000445714 574 ntBASIC19.34■□□□□ 0.69
LMO3Q8TAP4 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.34■□□□□ 0.69
LMO3Q8TAP4 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.34■□□□□ 0.69
LMO3Q8TAP4 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LMO3Q8TAP4 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
LMO3Q8TAP4 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LMO3Q8TAP4 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LMO3Q8TAP4 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.34■□□□□ 0.69
LMO3Q8TAP4 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
LMO3Q8TAP4 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
LMO3Q8TAP4 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
LMO3Q8TAP4 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
LMO3Q8TAP4 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
LMO3Q8TAP4 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LMO3Q8TAP4 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
LMO3Q8TAP4 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
LMO3Q8TAP4 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.33■□□□□ 0.69
LMO3Q8TAP4 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
LMO3Q8TAP4 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
LMO3Q8TAP4 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
LMO3Q8TAP4 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LMO3Q8TAP4 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LMO3Q8TAP4 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LMO3Q8TAP4 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.33■□□□□ 0.68
LMO3Q8TAP4 AC068472.1-201ENST00000474589 881 ntBASIC19.33■□□□□ 0.68
LMO3Q8TAP4 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.33■□□□□ 0.68
LMO3Q8TAP4 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
LMO3Q8TAP4 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
LMO3Q8TAP4 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.33■□□□□ 0.68
LMO3Q8TAP4 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LMO3Q8TAP4 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LMO3Q8TAP4 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LMO3Q8TAP4 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
LMO3Q8TAP4 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LMO3Q8TAP4 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
LMO3Q8TAP4 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LMO3Q8TAP4 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
LMO3Q8TAP4 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LMO3Q8TAP4 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LMO3Q8TAP4 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LMO3Q8TAP4 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.32■□□□□ 0.68
LMO3Q8TAP4 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LMO3Q8TAP4 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LMO3Q8TAP4 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LMO3Q8TAP4 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.32■□□□□ 0.68
LMO3Q8TAP4 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LMO3Q8TAP4 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
LMO3Q8TAP4 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
LMO3Q8TAP4 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
LMO3Q8TAP4 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LMO3Q8TAP4 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LMO3Q8TAP4 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LMO3Q8TAP4 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LMO3Q8TAP4 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LMO3Q8TAP4 AL031133.1-201ENST00000406807 723 ntBASIC19.32■□□□□ 0.68
LMO3Q8TAP4 TSPY12P-201ENST00000421279 868 ntBASIC19.32■□□□□ 0.68
LMO3Q8TAP4 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.32■□□□□ 0.68
LMO3Q8TAP4 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LMO3Q8TAP4 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LMO3Q8TAP4 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.32■□□□□ 0.68
LMO3Q8TAP4 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.32■□□□□ 0.68
LMO3Q8TAP4 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.32■□□□□ 0.68
LMO3Q8TAP4 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.32■□□□□ 0.68
LMO3Q8TAP4 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.32■□□□□ 0.68
LMO3Q8TAP4 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LMO3Q8TAP4 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LMO3Q8TAP4 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LMO3Q8TAP4 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LMO3Q8TAP4 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
LMO3Q8TAP4 Z83836.1-201ENST00000624605 1642 ntBASIC19.32■□□□□ 0.68
LMO3Q8TAP4 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LMO3Q8TAP4 AC009949.1-201ENST00000623048 1830 ntBASIC19.32■□□□□ 0.68
LMO3Q8TAP4 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LMO3Q8TAP4 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
LMO3Q8TAP4 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LMO3Q8TAP4 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.32■□□□□ 0.68
LMO3Q8TAP4 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LMO3Q8TAP4 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
LMO3Q8TAP4 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LMO3Q8TAP4 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
LMO3Q8TAP4 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LMO3Q8TAP4 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.31■□□□□ 0.68
LMO3Q8TAP4 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
LMO3Q8TAP4 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LMO3Q8TAP4 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
LMO3Q8TAP4 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LMO3Q8TAP4 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LMO3Q8TAP4 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LMO3Q8TAP4 AC112698.1-201ENST00000510299 916 ntBASIC19.31■□□□□ 0.68
LMO3Q8TAP4 AL136038.3-201ENST00000561909 1096 ntBASIC19.31■□□□□ 0.68
LMO3Q8TAP4 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.31■□□□□ 0.68
LMO3Q8TAP4 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LMO3Q8TAP4 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.31■□□□□ 0.68
LMO3Q8TAP4 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
LMO3Q8TAP4 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms