Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.44■□□□□ 0.54
PCDH20Q8N6Y1 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.44■□□□□ 0.54
PCDH20Q8N6Y1 AP002414.4-201ENST00000589764 1148 ntBASIC18.44■□□□□ 0.54
PCDH20Q8N6Y1 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.44■□□□□ 0.54
PCDH20Q8N6Y1 AC092329.2-201ENST00000598402 547 ntBASIC18.44■□□□□ 0.54
PCDH20Q8N6Y1 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDH20Q8N6Y1 AC092119.3-201ENST00000612618 583 ntBASIC18.44■□□□□ 0.54
PCDH20Q8N6Y1 IGHV3-41-201ENST00000613121 348 ntBASIC18.44■□□□□ 0.54
PCDH20Q8N6Y1 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
PCDH20Q8N6Y1 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH20Q8N6Y1 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH20Q8N6Y1 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH20Q8N6Y1 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH20Q8N6Y1 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH20Q8N6Y1 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH20Q8N6Y1 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDH20Q8N6Y1 KRT18P1-202ENST00000452408 1331 ntBASIC18.44■□□□□ 0.54
PCDH20Q8N6Y1 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDH20Q8N6Y1 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH20Q8N6Y1 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
PCDH20Q8N6Y1 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH20Q8N6Y1 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH20Q8N6Y1 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH20Q8N6Y1 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDH20Q8N6Y1 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDH20Q8N6Y1 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH20Q8N6Y1 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.43■□□□□ 0.54
PCDH20Q8N6Y1 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH20Q8N6Y1 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
PCDH20Q8N6Y1 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH20Q8N6Y1 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH20Q8N6Y1 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.43■□□□□ 0.54
PCDH20Q8N6Y1 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH20Q8N6Y1 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH20Q8N6Y1 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.43■□□□□ 0.54
PCDH20Q8N6Y1 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH20Q8N6Y1 KRT18P56-201ENST00000507275 550 ntBASIC18.43■□□□□ 0.54
PCDH20Q8N6Y1 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH20Q8N6Y1 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
PCDH20Q8N6Y1 MIR3180-1-201ENST00000580374 94 ntBASIC18.43■□□□□ 0.54
PCDH20Q8N6Y1 MIR3180-3-201ENST00000584616 94 ntBASIC18.43■□□□□ 0.54
PCDH20Q8N6Y1 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.43■□□□□ 0.54
PCDH20Q8N6Y1 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDH20Q8N6Y1 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH20Q8N6Y1 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH20Q8N6Y1 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.43■□□□□ 0.54
PCDH20Q8N6Y1 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH20Q8N6Y1 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
PCDH20Q8N6Y1 AL354751.1-201ENST00000412768 1863 ntBASIC18.43■□□□□ 0.54
PCDH20Q8N6Y1 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH20Q8N6Y1 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH20Q8N6Y1 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.43■□□□□ 0.54
PCDH20Q8N6Y1 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH20Q8N6Y1 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH20Q8N6Y1 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH20Q8N6Y1 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH20Q8N6Y1 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDH20Q8N6Y1 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDH20Q8N6Y1 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH20Q8N6Y1 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH20Q8N6Y1 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
PCDH20Q8N6Y1 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.42■□□□□ 0.54
PCDH20Q8N6Y1 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH20Q8N6Y1 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH20Q8N6Y1 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH20Q8N6Y1 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH20Q8N6Y1 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.42■□□□□ 0.54
PCDH20Q8N6Y1 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDH20Q8N6Y1 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH20Q8N6Y1 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH20Q8N6Y1 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH20Q8N6Y1 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
PCDH20Q8N6Y1 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH20Q8N6Y1 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.42■□□□□ 0.54
PCDH20Q8N6Y1 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.42■□□□□ 0.54
PCDH20Q8N6Y1 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDH20Q8N6Y1 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH20Q8N6Y1 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH20Q8N6Y1 DRAXINP1-201ENST00000437611 948 ntBASIC18.42■□□□□ 0.54
PCDH20Q8N6Y1 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH20Q8N6Y1 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
PCDH20Q8N6Y1 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDH20Q8N6Y1 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.42■□□□□ 0.54
PCDH20Q8N6Y1 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.42■□□□□ 0.54
PCDH20Q8N6Y1 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.42■□□□□ 0.54
PCDH20Q8N6Y1 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.42■□□□□ 0.54
PCDH20Q8N6Y1 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
PCDH20Q8N6Y1 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH20Q8N6Y1 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
PCDH20Q8N6Y1 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.42■□□□□ 0.54
PCDH20Q8N6Y1 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH20Q8N6Y1 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
PCDH20Q8N6Y1 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDH20Q8N6Y1 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDH20Q8N6Y1 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDH20Q8N6Y1 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDH20Q8N6Y1 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDH20Q8N6Y1 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDH20Q8N6Y1 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDH20Q8N6Y1 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms