Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 KRT18P57-201ENST00000443599 1254 ntBASIC17.68■□□□□ 0.42
CPSF7Q8N684 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.68■□□□□ 0.42
CPSF7Q8N684 KRT8P50-201ENST00000562022 1438 ntBASIC17.68■□□□□ 0.42
CPSF7Q8N684 C2orf69P3-201ENST00000565542 1120 ntBASIC17.68■□□□□ 0.42
CPSF7Q8N684 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPSF7Q8N684 AP005242.2-201ENST00000580065 1175 ntBASIC17.68■□□□□ 0.42
CPSF7Q8N684 AC092865.7-201ENST00000641832 219 ntBASIC17.68■□□□□ 0.42
CPSF7Q8N684 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPSF7Q8N684 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CPSF7Q8N684 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPSF7Q8N684 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.68■□□□□ 0.42
CPSF7Q8N684 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.68■□□□□ 0.42
CPSF7Q8N684 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.68■□□□□ 0.42
CPSF7Q8N684 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPSF7Q8N684 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CPSF7Q8N684 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPSF7Q8N684 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPSF7Q8N684 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CPSF7Q8N684 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CPSF7Q8N684 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPSF7Q8N684 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
CPSF7Q8N684 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPSF7Q8N684 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
CPSF7Q8N684 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CPSF7Q8N684 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPSF7Q8N684 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.67■□□□□ 0.42
CPSF7Q8N684 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPSF7Q8N684 SLC25A3P1-201ENST00000443844 931 ntBASIC17.67■□□□□ 0.42
CPSF7Q8N684 AC008040.2-201ENST00000461049 708 ntBASIC17.67■□□□□ 0.42
CPSF7Q8N684 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.67■□□□□ 0.42
CPSF7Q8N684 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.67■□□□□ 0.42
CPSF7Q8N684 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.67■□□□□ 0.42
CPSF7Q8N684 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CPSF7Q8N684 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPSF7Q8N684 AL023806.1-201ENST00000603994 1649 ntBASIC17.67■□□□□ 0.42
CPSF7Q8N684 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPSF7Q8N684 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
CPSF7Q8N684 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPSF7Q8N684 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.67■□□□□ 0.42
CPSF7Q8N684 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CPSF7Q8N684 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CPSF7Q8N684 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.67■□□□□ 0.42
CPSF7Q8N684 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPSF7Q8N684 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CPSF7Q8N684 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPSF7Q8N684 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPSF7Q8N684 AD000864.1-201ENST00000624076 2295 ntBASIC17.67■□□□□ 0.42
CPSF7Q8N684 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CPSF7Q8N684 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPSF7Q8N684 OR6D1P-202ENST00000641007 5290 ntBASIC17.66■□□□□ 0.42
CPSF7Q8N684 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CPSF7Q8N684 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.66■□□□□ 0.42
CPSF7Q8N684 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPSF7Q8N684 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.66■□□□□ 0.42
CPSF7Q8N684 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CPSF7Q8N684 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.66■□□□□ 0.42
CPSF7Q8N684 AL137013.1-201ENST00000432946 1228 ntBASIC17.66■□□□□ 0.42
CPSF7Q8N684 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.66■□□□□ 0.42
CPSF7Q8N684 AP000692.2-201ENST00000608391 879 ntBASIC17.66■□□□□ 0.42
CPSF7Q8N684 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
CPSF7Q8N684 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.66■□□□□ 0.42
CPSF7Q8N684 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPSF7Q8N684 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CPSF7Q8N684 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
CPSF7Q8N684 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPSF7Q8N684 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPSF7Q8N684 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
CPSF7Q8N684 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPSF7Q8N684 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.66■□□□□ 0.42
CPSF7Q8N684 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CPSF7Q8N684 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.66■□□□□ 0.42
CPSF7Q8N684 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CPSF7Q8N684 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPSF7Q8N684 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPSF7Q8N684 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.65■□□□□ 0.42
CPSF7Q8N684 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CPSF7Q8N684 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPSF7Q8N684 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CPSF7Q8N684 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPSF7Q8N684 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPSF7Q8N684 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CPSF7Q8N684 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPSF7Q8N684 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CPSF7Q8N684 AC124067.4-201ENST00000519691 2379 ntBASIC17.65■□□□□ 0.42
CPSF7Q8N684 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.65■□□□□ 0.42
CPSF7Q8N684 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CPSF7Q8N684 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPSF7Q8N684 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPSF7Q8N684 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPSF7Q8N684 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPSF7Q8N684 TERF1P1-201ENST00000311003 1181 ntBASIC17.65■□□□□ 0.42
CPSF7Q8N684 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPSF7Q8N684 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.65■□□□□ 0.42
CPSF7Q8N684 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.65■□□□□ 0.42
CPSF7Q8N684 FAM207BP-201ENST00000447172 505 ntBASIC17.65■□□□□ 0.42
CPSF7Q8N684 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.65■□□□□ 0.42
CPSF7Q8N684 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.65■□□□□ 0.42
CPSF7Q8N684 AC008622.2-201ENST00000617006 1229 ntBASIC17.65■□□□□ 0.42
CPSF7Q8N684 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.65■□□□□ 0.42
CPSF7Q8N684 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms