Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
ARHGEF39Q8N4T4 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
ARHGEF39Q8N4T4 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.02■□□□□ 0.31
ARHGEF39Q8N4T4 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
ARHGEF39Q8N4T4 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
ARHGEF39Q8N4T4 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.01■□□□□ 0.31
ARHGEF39Q8N4T4 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
ARHGEF39Q8N4T4 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ARHGEF39Q8N4T4 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ARHGEF39Q8N4T4 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
ARHGEF39Q8N4T4 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.01■□□□□ 0.31
ARHGEF39Q8N4T4 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.01■□□□□ 0.31
ARHGEF39Q8N4T4 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ARHGEF39Q8N4T4 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.01■□□□□ 0.31
ARHGEF39Q8N4T4 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.01■□□□□ 0.31
ARHGEF39Q8N4T4 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ARHGEF39Q8N4T4 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ARHGEF39Q8N4T4 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
ARHGEF39Q8N4T4 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ARHGEF39Q8N4T4 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ARHGEF39Q8N4T4 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ARHGEF39Q8N4T4 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.01■□□□□ 0.31
ARHGEF39Q8N4T4 TSPY19P-201ENST00000418461 509 ntBASIC17.01■□□□□ 0.31
ARHGEF39Q8N4T4 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.01■□□□□ 0.31
ARHGEF39Q8N4T4 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.01■□□□□ 0.31
ARHGEF39Q8N4T4 TSPY18P-201ENST00000441642 509 ntBASIC17.01■□□□□ 0.31
ARHGEF39Q8N4T4 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
ARHGEF39Q8N4T4 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.01■□□□□ 0.31
ARHGEF39Q8N4T4 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.01■□□□□ 0.31
ARHGEF39Q8N4T4 AC104819.1-201ENST00000504587 486 ntBASIC17.01■□□□□ 0.31
ARHGEF39Q8N4T4 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.01■□□□□ 0.31
ARHGEF39Q8N4T4 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.01■□□□□ 0.31
ARHGEF39Q8N4T4 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.01■□□□□ 0.31
ARHGEF39Q8N4T4 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.01■□□□□ 0.31
ARHGEF39Q8N4T4 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.01■□□□□ 0.31
ARHGEF39Q8N4T4 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ARHGEF39Q8N4T4 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ARHGEF39Q8N4T4 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ARHGEF39Q8N4T4 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.01■□□□□ 0.31
ARHGEF39Q8N4T4 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
ARHGEF39Q8N4T4 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.01■□□□□ 0.31
ARHGEF39Q8N4T4 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.01■□□□□ 0.31
ARHGEF39Q8N4T4 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
ARHGEF39Q8N4T4 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
ARHGEF39Q8N4T4 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ARHGEF39Q8N4T4 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
ARHGEF39Q8N4T4 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ARHGEF39Q8N4T4 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ARHGEF39Q8N4T4 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ARHGEF39Q8N4T4 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ARHGEF39Q8N4T4 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
ARHGEF39Q8N4T4 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ARHGEF39Q8N4T4 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17■□□□□ 0.31
ARHGEF39Q8N4T4 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ARHGEF39Q8N4T4 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ARHGEF39Q8N4T4 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
ARHGEF39Q8N4T4 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ARHGEF39Q8N4T4 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ARHGEF39Q8N4T4 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17■□□□□ 0.31
ARHGEF39Q8N4T4 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
ARHGEF39Q8N4T4 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
ARHGEF39Q8N4T4 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
ARHGEF39Q8N4T4 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ARHGEF39Q8N4T4 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
ARHGEF39Q8N4T4 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17■□□□□ 0.31
ARHGEF39Q8N4T4 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17■□□□□ 0.31
ARHGEF39Q8N4T4 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17■□□□□ 0.31
ARHGEF39Q8N4T4 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17■□□□□ 0.31
ARHGEF39Q8N4T4 VENTXP7-201ENST00000475503 772 ntBASIC17■□□□□ 0.31
ARHGEF39Q8N4T4 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17■□□□□ 0.31
ARHGEF39Q8N4T4 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17■□□□□ 0.31
ARHGEF39Q8N4T4 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
ARHGEF39Q8N4T4 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17■□□□□ 0.31
ARHGEF39Q8N4T4 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17■□□□□ 0.31
ARHGEF39Q8N4T4 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17■□□□□ 0.31
ARHGEF39Q8N4T4 AP000997.3-201ENST00000623333 2250 ntBASIC17■□□□□ 0.31
ARHGEF39Q8N4T4 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17■□□□□ 0.31
ARHGEF39Q8N4T4 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
ARHGEF39Q8N4T4 AC138932.1-201ENST00000534164 6830 ntBASIC17■□□□□ 0.31
ARHGEF39Q8N4T4 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
ARHGEF39Q8N4T4 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ARHGEF39Q8N4T4 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17■□□□□ 0.31
ARHGEF39Q8N4T4 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ARHGEF39Q8N4T4 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ARHGEF39Q8N4T4 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
ARHGEF39Q8N4T4 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
ARHGEF39Q8N4T4 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ARHGEF39Q8N4T4 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ARHGEF39Q8N4T4 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ARHGEF39Q8N4T4 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ARHGEF39Q8N4T4 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ARHGEF39Q8N4T4 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.99■□□□□ 0.31
ARHGEF39Q8N4T4 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ARHGEF39Q8N4T4 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.99■□□□□ 0.31
ARHGEF39Q8N4T4 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.99■□□□□ 0.31
ARHGEF39Q8N4T4 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.99■□□□□ 0.31
ARHGEF39Q8N4T4 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.99■□□□□ 0.31
ARHGEF39Q8N4T4 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
ARHGEF39Q8N4T4 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
ARHGEF39Q8N4T4 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms