Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC24.86■■□□□ 1.57
ARHGEF28Q8N1W1 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC24.86■■□□□ 1.57
ARHGEF28Q8N1W1 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
ARHGEF28Q8N1W1 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC24.86■■□□□ 1.57
ARHGEF28Q8N1W1 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
ARHGEF28Q8N1W1 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC24.86■■□□□ 1.57
ARHGEF28Q8N1W1 AL591424.1-201ENST00000442569 1213 ntBASIC24.86■■□□□ 1.57
ARHGEF28Q8N1W1 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC24.86■■□□□ 1.57
ARHGEF28Q8N1W1 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC24.86■■□□□ 1.57
ARHGEF28Q8N1W1 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
ARHGEF28Q8N1W1 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
ARHGEF28Q8N1W1 ZNF259P1-201ENST00000407656 1365 ntBASIC24.85■■□□□ 1.57
ARHGEF28Q8N1W1 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
ARHGEF28Q8N1W1 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC24.85■■□□□ 1.57
ARHGEF28Q8N1W1 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
ARHGEF28Q8N1W1 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
ARHGEF28Q8N1W1 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC24.85■■□□□ 1.57
ARHGEF28Q8N1W1 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC24.85■■□□□ 1.57
ARHGEF28Q8N1W1 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC24.85■■□□□ 1.57
ARHGEF28Q8N1W1 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC24.85■■□□□ 1.57
ARHGEF28Q8N1W1 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
ARHGEF28Q8N1W1 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
ARHGEF28Q8N1W1 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC24.85■■□□□ 1.57
ARHGEF28Q8N1W1 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC24.85■■□□□ 1.57
ARHGEF28Q8N1W1 TBC1D3P5-201ENST00000579401 1545 ntBASIC24.85■■□□□ 1.57
ARHGEF28Q8N1W1 SIRPAP1-201ENST00000448467 1770 ntBASIC24.85■■□□□ 1.57
ARHGEF28Q8N1W1 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
ARHGEF28Q8N1W1 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
ARHGEF28Q8N1W1 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
ARHGEF28Q8N1W1 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC24.84■■□□□ 1.57
ARHGEF28Q8N1W1 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
ARHGEF28Q8N1W1 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
ARHGEF28Q8N1W1 MSRA-206ENST00000521209 814 ntTSL 3 BASIC24.84■■□□□ 1.57
ARHGEF28Q8N1W1 UNC93B6-202ENST00000528242 690 ntBASIC24.84■■□□□ 1.57
ARHGEF28Q8N1W1 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC24.84■■□□□ 1.57
ARHGEF28Q8N1W1 AC105339.3-201ENST00000560043 636 ntBASIC24.84■■□□□ 1.57
ARHGEF28Q8N1W1 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC24.84■■□□□ 1.57
ARHGEF28Q8N1W1 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
ARHGEF28Q8N1W1 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
ARHGEF28Q8N1W1 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
ARHGEF28Q8N1W1 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC24.84■■□□□ 1.57
ARHGEF28Q8N1W1 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
ARHGEF28Q8N1W1 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
ARHGEF28Q8N1W1 NCF1C-201ENST00000438382 1427 ntBASIC24.84■■□□□ 1.57
ARHGEF28Q8N1W1 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC24.84■■□□□ 1.57
ARHGEF28Q8N1W1 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
ARHGEF28Q8N1W1 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
ARHGEF28Q8N1W1 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
ARHGEF28Q8N1W1 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC24.84■■□□□ 1.57
ARHGEF28Q8N1W1 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC24.84■■□□□ 1.57
ARHGEF28Q8N1W1 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC24.84■■□□□ 1.57
ARHGEF28Q8N1W1 PMS2P7-201ENST00000506558 1336 ntBASIC24.84■■□□□ 1.57
ARHGEF28Q8N1W1 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
ARHGEF28Q8N1W1 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC24.84■■□□□ 1.57
ARHGEF28Q8N1W1 FUT8-AS1-201ENST00000621019 1521 ntBASIC24.84■■□□□ 1.57
ARHGEF28Q8N1W1 AC093503.3-201ENST00000624917 2352 ntBASIC24.84■■□□□ 1.57
ARHGEF28Q8N1W1 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC24.83■■□□□ 1.57
ARHGEF28Q8N1W1 AC009947.1-201ENST00000444350 727 ntBASIC24.83■■□□□ 1.57
ARHGEF28Q8N1W1 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
ARHGEF28Q8N1W1 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC24.83■■□□□ 1.57
ARHGEF28Q8N1W1 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
ARHGEF28Q8N1W1 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
ARHGEF28Q8N1W1 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC24.83■■□□□ 1.57
ARHGEF28Q8N1W1 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
ARHGEF28Q8N1W1 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC24.83■■□□□ 1.57
ARHGEF28Q8N1W1 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
ARHGEF28Q8N1W1 FLYWCH1P1-201ENST00000460917 1874 ntBASIC24.83■■□□□ 1.57
ARHGEF28Q8N1W1 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC24.83■■□□□ 1.57
ARHGEF28Q8N1W1 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
ARHGEF28Q8N1W1 AC132938.5-201ENST00000624980 1813 ntBASIC24.83■■□□□ 1.57
ARHGEF28Q8N1W1 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
ARHGEF28Q8N1W1 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC24.83■■□□□ 1.57
ARHGEF28Q8N1W1 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
ARHGEF28Q8N1W1 MIR1233-2-201ENST00000408138 82 ntBASIC24.83■■□□□ 1.57
ARHGEF28Q8N1W1 MIR1233-1-201ENST00000408722 82 ntBASIC24.83■■□□□ 1.57
ARHGEF28Q8N1W1 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC24.83■■□□□ 1.57
ARHGEF28Q8N1W1 AC073592.5-201ENST00000624854 528 ntBASIC24.83■■□□□ 1.57
ARHGEF28Q8N1W1 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
ARHGEF28Q8N1W1 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.56
ARHGEF28Q8N1W1 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
ARHGEF28Q8N1W1 FABP5-202ENST00000396359 986 ntTSL 5 BASIC24.82■■□□□ 1.56
ARHGEF28Q8N1W1 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC24.82■■□□□ 1.56
ARHGEF28Q8N1W1 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC24.82■■□□□ 1.56
ARHGEF28Q8N1W1 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC24.82■■□□□ 1.56
ARHGEF28Q8N1W1 AL022326.1-202ENST00000641533 845 ntBASIC24.82■■□□□ 1.56
ARHGEF28Q8N1W1 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC24.82■■□□□ 1.56
ARHGEF28Q8N1W1 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
ARHGEF28Q8N1W1 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
ARHGEF28Q8N1W1 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC24.82■■□□□ 1.56
ARHGEF28Q8N1W1 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
ARHGEF28Q8N1W1 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC24.81■■□□□ 1.56
ARHGEF28Q8N1W1 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
ARHGEF28Q8N1W1 RPS2P28-201ENST00000314255 741 ntBASIC24.81■■□□□ 1.56
ARHGEF28Q8N1W1 INIP-202ENST00000374236 874 ntTSL 2 BASIC24.81■■□□□ 1.56
ARHGEF28Q8N1W1 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC24.81■■□□□ 1.56
ARHGEF28Q8N1W1 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC24.81■■□□□ 1.56
ARHGEF28Q8N1W1 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
ARHGEF28Q8N1W1 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC24.81■■□□□ 1.56
ARHGEF28Q8N1W1 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC24.81■■□□□ 1.56
ARHGEF28Q8N1W1 AC006557.2-201ENST00000592985 1240 ntBASIC24.81■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms