Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL27A1Q8IZC6 AC132938.5-201ENST00000624980 1813 ntBASIC16.9■□□□□ 0.3
COL27A1Q8IZC6 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.9■□□□□ 0.3
COL27A1Q8IZC6 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.9■□□□□ 0.3
COL27A1Q8IZC6 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.9■□□□□ 0.3
COL27A1Q8IZC6 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.9■□□□□ 0.3
COL27A1Q8IZC6 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.9■□□□□ 0.3
COL27A1Q8IZC6 AL513190.1-201ENST00000621254 727 ntBASIC16.9■□□□□ 0.3
COL27A1Q8IZC6 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.9■□□□□ 0.3
COL27A1Q8IZC6 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.9■□□□□ 0.3
COL27A1Q8IZC6 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL27A1Q8IZC6 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL27A1Q8IZC6 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL27A1Q8IZC6 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL27A1Q8IZC6 SIRPAP1-201ENST00000448467 1770 ntBASIC16.9■□□□□ 0.3
COL27A1Q8IZC6 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.9■□□□□ 0.3
COL27A1Q8IZC6 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.3
COL27A1Q8IZC6 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
COL27A1Q8IZC6 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
COL27A1Q8IZC6 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.89■□□□□ 0.29
COL27A1Q8IZC6 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL27A1Q8IZC6 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL27A1Q8IZC6 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.89■□□□□ 0.29
COL27A1Q8IZC6 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COL27A1Q8IZC6 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.89■□□□□ 0.29
COL27A1Q8IZC6 AC254562.1-201ENST00000417586 456 ntBASIC16.89■□□□□ 0.29
COL27A1Q8IZC6 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.89■□□□□ 0.29
COL27A1Q8IZC6 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.89■□□□□ 0.29
COL27A1Q8IZC6 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COL27A1Q8IZC6 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.89■□□□□ 0.29
COL27A1Q8IZC6 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.89■□□□□ 0.29
COL27A1Q8IZC6 AC073592.5-201ENST00000624854 528 ntBASIC16.89■□□□□ 0.29
COL27A1Q8IZC6 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.89■□□□□ 0.29
COL27A1Q8IZC6 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.89■□□□□ 0.29
COL27A1Q8IZC6 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL27A1Q8IZC6 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL27A1Q8IZC6 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.89■□□□□ 0.29
COL27A1Q8IZC6 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL27A1Q8IZC6 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.89■□□□□ 0.29
COL27A1Q8IZC6 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
COL27A1Q8IZC6 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL27A1Q8IZC6 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
COL27A1Q8IZC6 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.88■□□□□ 0.29
COL27A1Q8IZC6 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.88■□□□□ 0.29
COL27A1Q8IZC6 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.88■□□□□ 0.29
COL27A1Q8IZC6 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.88■□□□□ 0.29
COL27A1Q8IZC6 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.88■□□□□ 0.29
COL27A1Q8IZC6 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.88■□□□□ 0.29
COL27A1Q8IZC6 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC16.88■□□□□ 0.29
COL27A1Q8IZC6 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
COL27A1Q8IZC6 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL27A1Q8IZC6 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.88■□□□□ 0.29
COL27A1Q8IZC6 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
COL27A1Q8IZC6 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL27A1Q8IZC6 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.88■□□□□ 0.29
COL27A1Q8IZC6 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL27A1Q8IZC6 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.88■□□□□ 0.29
COL27A1Q8IZC6 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
COL27A1Q8IZC6 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
COL27A1Q8IZC6 CRYGEP-201ENST00000412192 528 ntBASIC16.88■□□□□ 0.29
COL27A1Q8IZC6 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.88■□□□□ 0.29
COL27A1Q8IZC6 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.88■□□□□ 0.29
COL27A1Q8IZC6 MIR3687-2-201ENST00000577708 61 ntBASIC16.88■□□□□ 0.29
COL27A1Q8IZC6 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.88■□□□□ 0.29
COL27A1Q8IZC6 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.88■□□□□ 0.29
COL27A1Q8IZC6 MIR3687-1-201ENST00000614492 61 ntBASIC16.88■□□□□ 0.29
COL27A1Q8IZC6 AC004706.3-202ENST00000621574 984 ntBASIC16.88■□□□□ 0.29
COL27A1Q8IZC6 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.88■□□□□ 0.29
COL27A1Q8IZC6 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL27A1Q8IZC6 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.88■□□□□ 0.29
COL27A1Q8IZC6 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
COL27A1Q8IZC6 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.87■□□□□ 0.29
COL27A1Q8IZC6 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL27A1Q8IZC6 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL27A1Q8IZC6 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL27A1Q8IZC6 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL27A1Q8IZC6 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL27A1Q8IZC6 IGLL3P-201ENST00000412472 434 ntBASIC16.87■□□□□ 0.29
COL27A1Q8IZC6 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.87■□□□□ 0.29
COL27A1Q8IZC6 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.87■□□□□ 0.29
COL27A1Q8IZC6 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
COL27A1Q8IZC6 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.87■□□□□ 0.29
COL27A1Q8IZC6 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.87■□□□□ 0.29
COL27A1Q8IZC6 AC008667.4-201ENST00000607370 168 ntBASIC16.87■□□□□ 0.29
COL27A1Q8IZC6 AC010654.1-201ENST00000615722 808 ntBASIC16.87■□□□□ 0.29
COL27A1Q8IZC6 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL27A1Q8IZC6 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL27A1Q8IZC6 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL27A1Q8IZC6 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL27A1Q8IZC6 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC16.87■□□□□ 0.29
COL27A1Q8IZC6 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.87■□□□□ 0.29
COL27A1Q8IZC6 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
COL27A1Q8IZC6 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL27A1Q8IZC6 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
COL27A1Q8IZC6 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC16.87■□□□□ 0.29
COL27A1Q8IZC6 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.87■□□□□ 0.29
COL27A1Q8IZC6 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL27A1Q8IZC6 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.87■□□□□ 0.29
COL27A1Q8IZC6 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL27A1Q8IZC6 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms