Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
RFX6Q8HWS3 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RFX6Q8HWS3 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
RFX6Q8HWS3 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
RFX6Q8HWS3 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
RFX6Q8HWS3 FZD10-202ENST00000539839 3282 ntBASIC18.81■□□□□ 0.6
RFX6Q8HWS3 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RFX6Q8HWS3 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFX6Q8HWS3 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFX6Q8HWS3 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFX6Q8HWS3 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.81■□□□□ 0.6
RFX6Q8HWS3 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.81■□□□□ 0.6
RFX6Q8HWS3 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.81■□□□□ 0.6
RFX6Q8HWS3 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
RFX6Q8HWS3 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
RFX6Q8HWS3 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RFX6Q8HWS3 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFX6Q8HWS3 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.81■□□□□ 0.6
RFX6Q8HWS3 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RFX6Q8HWS3 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
RFX6Q8HWS3 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFX6Q8HWS3 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RFX6Q8HWS3 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.81■□□□□ 0.6
RFX6Q8HWS3 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFX6Q8HWS3 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.81■□□□□ 0.6
RFX6Q8HWS3 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFX6Q8HWS3 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RFX6Q8HWS3 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFX6Q8HWS3 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFX6Q8HWS3 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RFX6Q8HWS3 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RFX6Q8HWS3 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFX6Q8HWS3 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFX6Q8HWS3 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.8■□□□□ 0.6
RFX6Q8HWS3 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFX6Q8HWS3 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFX6Q8HWS3 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.8■□□□□ 0.6
RFX6Q8HWS3 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.8■□□□□ 0.6
RFX6Q8HWS3 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.8■□□□□ 0.6
RFX6Q8HWS3 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.8■□□□□ 0.6
RFX6Q8HWS3 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFX6Q8HWS3 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
RFX6Q8HWS3 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFX6Q8HWS3 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.8■□□□□ 0.6
RFX6Q8HWS3 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RFX6Q8HWS3 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFX6Q8HWS3 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.8■□□□□ 0.6
RFX6Q8HWS3 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.8■□□□□ 0.6
RFX6Q8HWS3 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.8■□□□□ 0.6
RFX6Q8HWS3 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.8■□□□□ 0.6
RFX6Q8HWS3 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.8■□□□□ 0.6
RFX6Q8HWS3 SLC25A3P1-201ENST00000443844 931 ntBASIC18.8■□□□□ 0.6
RFX6Q8HWS3 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RFX6Q8HWS3 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.8■□□□□ 0.6
RFX6Q8HWS3 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.8■□□□□ 0.6
RFX6Q8HWS3 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFX6Q8HWS3 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFX6Q8HWS3 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFX6Q8HWS3 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RFX6Q8HWS3 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RFX6Q8HWS3 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
RFX6Q8HWS3 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFX6Q8HWS3 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
RFX6Q8HWS3 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
RFX6Q8HWS3 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RFX6Q8HWS3 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RFX6Q8HWS3 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.79■□□□□ 0.6
RFX6Q8HWS3 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.79■□□□□ 0.6
RFX6Q8HWS3 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
RFX6Q8HWS3 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RFX6Q8HWS3 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
RFX6Q8HWS3 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RFX6Q8HWS3 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RFX6Q8HWS3 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RFX6Q8HWS3 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.79■□□□□ 0.6
RFX6Q8HWS3 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RFX6Q8HWS3 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RFX6Q8HWS3 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RFX6Q8HWS3 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RFX6Q8HWS3 LIN28AP1-201ENST00000429574 405 ntBASIC18.79■□□□□ 0.6
RFX6Q8HWS3 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.79■□□□□ 0.6
RFX6Q8HWS3 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RFX6Q8HWS3 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.79■□□□□ 0.6
RFX6Q8HWS3 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.79■□□□□ 0.6
RFX6Q8HWS3 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.79■□□□□ 0.6
RFX6Q8HWS3 GCSHP2-201ENST00000560971 527 ntBASIC18.79■□□□□ 0.6
RFX6Q8HWS3 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.79■□□□□ 0.6
RFX6Q8HWS3 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.79■□□□□ 0.6
RFX6Q8HWS3 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RFX6Q8HWS3 AL023973.1-201ENST00000624619 620 ntBASIC18.79■□□□□ 0.6
RFX6Q8HWS3 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
RFX6Q8HWS3 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.79■□□□□ 0.6
RFX6Q8HWS3 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RFX6Q8HWS3 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RFX6Q8HWS3 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RFX6Q8HWS3 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
RFX6Q8HWS3 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RFX6Q8HWS3 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RFX6Q8HWS3 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RFX6Q8HWS3 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms