Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 AC004870.1-201ENST00000315132 882 ntBASIC17.26■□□□□ 0.35
RAB43Q86YS6 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB43Q86YS6 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB43Q86YS6 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.26■□□□□ 0.35
RAB43Q86YS6 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB43Q86YS6 DRAXINP1-201ENST00000437611 948 ntBASIC17.26■□□□□ 0.35
RAB43Q86YS6 NUS1P1-201ENST00000446295 882 ntBASIC17.26■□□□□ 0.35
RAB43Q86YS6 LINC00265-3P-201ENST00000447588 903 ntBASIC17.26■□□□□ 0.35
RAB43Q86YS6 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.26■□□□□ 0.35
RAB43Q86YS6 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RAB43Q86YS6 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.26■□□□□ 0.35
RAB43Q86YS6 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.26■□□□□ 0.35
RAB43Q86YS6 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
RAB43Q86YS6 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.26■□□□□ 0.35
RAB43Q86YS6 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB43Q86YS6 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB43Q86YS6 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB43Q86YS6 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RAB43Q86YS6 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB43Q86YS6 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB43Q86YS6 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.26■□□□□ 0.35
RAB43Q86YS6 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB43Q86YS6 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RAB43Q86YS6 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
RAB43Q86YS6 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB43Q86YS6 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.25■□□□□ 0.35
RAB43Q86YS6 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.25■□□□□ 0.35
RAB43Q86YS6 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
RAB43Q86YS6 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.25■□□□□ 0.35
RAB43Q86YS6 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
RAB43Q86YS6 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB43Q86YS6 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RAB43Q86YS6 OR6D1P-202ENST00000641007 5290 ntBASIC17.25■□□□□ 0.35
RAB43Q86YS6 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.25■□□□□ 0.35
RAB43Q86YS6 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RAB43Q86YS6 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.25■□□□□ 0.35
RAB43Q86YS6 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RAB43Q86YS6 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB43Q86YS6 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RAB43Q86YS6 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB43Q86YS6 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
RAB43Q86YS6 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.25■□□□□ 0.35
RAB43Q86YS6 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.25■□□□□ 0.35
RAB43Q86YS6 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.25■□□□□ 0.35
RAB43Q86YS6 AP000867.3-201ENST00000524675 377 ntBASIC17.25■□□□□ 0.35
RAB43Q86YS6 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.25■□□□□ 0.35
RAB43Q86YS6 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.25■□□□□ 0.35
RAB43Q86YS6 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.25■□□□□ 0.35
RAB43Q86YS6 AC005332.3-201ENST00000589904 676 ntBASIC17.25■□□□□ 0.35
RAB43Q86YS6 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB43Q86YS6 AC024563.2-201ENST00000603282 481 ntBASIC17.25■□□□□ 0.35
RAB43Q86YS6 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB43Q86YS6 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RAB43Q86YS6 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
RAB43Q86YS6 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
RAB43Q86YS6 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RAB43Q86YS6 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB43Q86YS6 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB43Q86YS6 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RAB43Q86YS6 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB43Q86YS6 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
RAB43Q86YS6 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RAB43Q86YS6 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB43Q86YS6 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB43Q86YS6 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.24■□□□□ 0.35
RAB43Q86YS6 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB43Q86YS6 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAB43Q86YS6 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB43Q86YS6 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.24■□□□□ 0.35
RAB43Q86YS6 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
RAB43Q86YS6 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.24■□□□□ 0.35
RAB43Q86YS6 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.24■□□□□ 0.35
RAB43Q86YS6 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB43Q86YS6 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.24■□□□□ 0.35
RAB43Q86YS6 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
RAB43Q86YS6 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB43Q86YS6 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.24■□□□□ 0.35
RAB43Q86YS6 TPSP2-201ENST00000561760 610 ntBASIC17.24■□□□□ 0.35
RAB43Q86YS6 GPR32P1-201ENST00000601788 811 ntBASIC17.24■□□□□ 0.35
RAB43Q86YS6 AL390719.2-201ENST00000606993 987 ntBASIC17.24■□□□□ 0.35
RAB43Q86YS6 IGHV3-41-201ENST00000613121 348 ntBASIC17.24■□□□□ 0.35
RAB43Q86YS6 Z98044.1-201ENST00000632503 1764 ntBASIC17.24■□□□□ 0.35
RAB43Q86YS6 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.24■□□□□ 0.35
RAB43Q86YS6 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.24■□□□□ 0.35
RAB43Q86YS6 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB43Q86YS6 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB43Q86YS6 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
RAB43Q86YS6 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB43Q86YS6 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB43Q86YS6 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB43Q86YS6 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB43Q86YS6 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAB43Q86YS6 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB43Q86YS6 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
RAB43Q86YS6 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAB43Q86YS6 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB43Q86YS6 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RAB43Q86YS6 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
RAB43Q86YS6 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB43Q86YS6 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms