Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM50Q86XT4 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.09■□□□□ 0.81
TRIM50Q86XT4 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.09■□□□□ 0.81
TRIM50Q86XT4 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM50Q86XT4 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM50Q86XT4 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
TRIM50Q86XT4 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM50Q86XT4 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
TRIM50Q86XT4 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM50Q86XT4 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
TRIM50Q86XT4 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM50Q86XT4 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
TRIM50Q86XT4 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.09■□□□□ 0.81
TRIM50Q86XT4 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC20.09■□□□□ 0.81
TRIM50Q86XT4 RNA5SP419-201ENST00000515908 135 ntBASIC20.09■□□□□ 0.81
TRIM50Q86XT4 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC20.09■□□□□ 0.81
TRIM50Q86XT4 AP001269.4-201ENST00000609611 512 ntBASIC20.09■□□□□ 0.81
TRIM50Q86XT4 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM50Q86XT4 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
TRIM50Q86XT4 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM50Q86XT4 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC20.09■□□□□ 0.81
TRIM50Q86XT4 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
TRIM50Q86XT4 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
TRIM50Q86XT4 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM50Q86XT4 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM50Q86XT4 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
TRIM50Q86XT4 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.08■□□□□ 0.81
TRIM50Q86XT4 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM50Q86XT4 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC20.08■□□□□ 0.81
TRIM50Q86XT4 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC20.08■□□□□ 0.81
TRIM50Q86XT4 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM50Q86XT4 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.08■□□□□ 0.81
TRIM50Q86XT4 INTS4P1-201ENST00000438455 1935 ntBASIC20.08■□□□□ 0.81
TRIM50Q86XT4 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.08■□□□□ 0.81
TRIM50Q86XT4 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC20.08■□□□□ 0.81
TRIM50Q86XT4 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
TRIM50Q86XT4 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM50Q86XT4 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM50Q86XT4 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
TRIM50Q86XT4 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM50Q86XT4 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM50Q86XT4 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM50Q86XT4 FAM197Y8-203ENST00000450145 560 ntBASIC20.08■□□□□ 0.81
TRIM50Q86XT4 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM50Q86XT4 AC112698.1-201ENST00000510299 916 ntBASIC20.08■□□□□ 0.81
TRIM50Q86XT4 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM50Q86XT4 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC20.08■□□□□ 0.81
TRIM50Q86XT4 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC20.08■□□□□ 0.81
TRIM50Q86XT4 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRIM50Q86XT4 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.8
TRIM50Q86XT4 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.08■□□□□ 0.8
TRIM50Q86XT4 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRIM50Q86XT4 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRIM50Q86XT4 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.08■□□□□ 0.8
TRIM50Q86XT4 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRIM50Q86XT4 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRIM50Q86XT4 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.07■□□□□ 0.8
TRIM50Q86XT4 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM50Q86XT4 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM50Q86XT4 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM50Q86XT4 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM50Q86XT4 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
TRIM50Q86XT4 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
TRIM50Q86XT4 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC20.07■□□□□ 0.8
TRIM50Q86XT4 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
TRIM50Q86XT4 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC20.07■□□□□ 0.8
TRIM50Q86XT4 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC20.07■□□□□ 0.8
TRIM50Q86XT4 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC20.07■□□□□ 0.8
TRIM50Q86XT4 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC20.07■□□□□ 0.8
TRIM50Q86XT4 AC011467.2-201ENST00000598425 242 ntBASIC20.07■□□□□ 0.8
TRIM50Q86XT4 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC20.07■□□□□ 0.8
TRIM50Q86XT4 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC20.07■□□□□ 0.8
TRIM50Q86XT4 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC20.07■□□□□ 0.8
TRIM50Q86XT4 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.07■□□□□ 0.8
TRIM50Q86XT4 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC20.07■□□□□ 0.8
TRIM50Q86XT4 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM50Q86XT4 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM50Q86XT4 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM50Q86XT4 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC20.07■□□□□ 0.8
TRIM50Q86XT4 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM50Q86XT4 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.07■□□□□ 0.8
TRIM50Q86XT4 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.07■□□□□ 0.8
TRIM50Q86XT4 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM50Q86XT4 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
TRIM50Q86XT4 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM50Q86XT4 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.06■□□□□ 0.8
TRIM50Q86XT4 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
TRIM50Q86XT4 PHGDH-209ENST00000641074 1780 ntBASIC20.06■□□□□ 0.8
TRIM50Q86XT4 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM50Q86XT4 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM50Q86XT4 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM50Q86XT4 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM50Q86XT4 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM50Q86XT4 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM50Q86XT4 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
TRIM50Q86XT4 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.06■□□□□ 0.8
TRIM50Q86XT4 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
TRIM50Q86XT4 PENK-208ENST00000523051 772 ntTSL 5 BASIC20.06■□□□□ 0.8
TRIM50Q86XT4 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.06■□□□□ 0.8
TRIM50Q86XT4 AC009533.2-201ENST00000543664 586 ntBASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms