Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC28Q86X40 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC28Q86X40 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC28Q86X40 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC28Q86X40 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC28Q86X40 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC28Q86X40 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
LRRC28Q86X40 CRYGFP-201ENST00000418459 633 ntBASIC16.1■□□□□ 0.17
LRRC28Q86X40 AL390955.1-201ENST00000428694 934 ntBASIC16.1■□□□□ 0.17
LRRC28Q86X40 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC28Q86X40 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.1■□□□□ 0.17
LRRC28Q86X40 AC012306.2-201ENST00000609350 630 ntBASIC16.1■□□□□ 0.17
LRRC28Q86X40 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC28Q86X40 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC28Q86X40 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC28Q86X40 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.1■□□□□ 0.17
LRRC28Q86X40 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.1■□□□□ 0.17
LRRC28Q86X40 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC28Q86X40 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.1■□□□□ 0.17
LRRC28Q86X40 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
LRRC28Q86X40 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC28Q86X40 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC28Q86X40 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.1■□□□□ 0.17
LRRC28Q86X40 KRT8P9-201ENST00000558927 1449 ntBASIC16.1■□□□□ 0.17
LRRC28Q86X40 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC28Q86X40 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC28Q86X40 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
LRRC28Q86X40 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC28Q86X40 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.1■□□□□ 0.17
LRRC28Q86X40 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRC28Q86X40 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRC28Q86X40 KRT8P41-201ENST00000533985 1514 ntBASIC16.09■□□□□ 0.17
LRRC28Q86X40 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.09■□□□□ 0.17
LRRC28Q86X40 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRC28Q86X40 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.09■□□□□ 0.17
LRRC28Q86X40 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRC28Q86X40 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.09■□□□□ 0.17
LRRC28Q86X40 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRC28Q86X40 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRC28Q86X40 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.09■□□□□ 0.17
LRRC28Q86X40 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.09■□□□□ 0.17
LRRC28Q86X40 NAPSB-206ENST00000562112 1266 ntBASIC16.09■□□□□ 0.17
LRRC28Q86X40 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.09■□□□□ 0.17
LRRC28Q86X40 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.09■□□□□ 0.17
LRRC28Q86X40 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRC28Q86X40 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
LRRC28Q86X40 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LRRC28Q86X40 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.09■□□□□ 0.17
LRRC28Q86X40 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.09■□□□□ 0.17
LRRC28Q86X40 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
LRRC28Q86X40 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRC28Q86X40 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
LRRC28Q86X40 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRC28Q86X40 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LRRC28Q86X40 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LRRC28Q86X40 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
LRRC28Q86X40 AL023806.1-201ENST00000603994 1649 ntBASIC16.08■□□□□ 0.17
LRRC28Q86X40 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LRRC28Q86X40 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
LRRC28Q86X40 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.08■□□□□ 0.17
LRRC28Q86X40 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
LRRC28Q86X40 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC28Q86X40 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC28Q86X40 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.08■□□□□ 0.16
LRRC28Q86X40 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.08■□□□□ 0.16
LRRC28Q86X40 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC28Q86X40 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC28Q86X40 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC28Q86X40 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC28Q86X40 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.08■□□□□ 0.16
LRRC28Q86X40 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC28Q86X40 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.08■□□□□ 0.16
LRRC28Q86X40 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC28Q86X40 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
LRRC28Q86X40 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.08■□□□□ 0.16
LRRC28Q86X40 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC28Q86X40 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
LRRC28Q86X40 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.08■□□□□ 0.16
LRRC28Q86X40 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.08■□□□□ 0.16
LRRC28Q86X40 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC28Q86X40 AC096733.2-201ENST00000609937 1394 ntBASIC16.08■□□□□ 0.16
LRRC28Q86X40 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC28Q86X40 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC28Q86X40 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.08■□□□□ 0.16
LRRC28Q86X40 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.08■□□□□ 0.16
LRRC28Q86X40 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.08■□□□□ 0.16
LRRC28Q86X40 NKILA-202ENST00000614771 2598 ntBASIC16.08■□□□□ 0.16
LRRC28Q86X40 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.08■□□□□ 0.16
LRRC28Q86X40 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC28Q86X40 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC28Q86X40 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC28Q86X40 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC28Q86X40 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC28Q86X40 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC28Q86X40 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC28Q86X40 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC28Q86X40 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC28Q86X40 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC28Q86X40 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC28Q86X40 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms