Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
MRPL55Q7Z7F7 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
MRPL55Q7Z7F7 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
MRPL55Q7Z7F7 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
MRPL55Q7Z7F7 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
MRPL55Q7Z7F7 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC11.65□□□□□ -0.54
MRPL55Q7Z7F7 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
MRPL55Q7Z7F7 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC11.65□□□□□ -0.54
MRPL55Q7Z7F7 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC11.65□□□□□ -0.54
MRPL55Q7Z7F7 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC11.65□□□□□ -0.54
MRPL55Q7Z7F7 DHDH-203ENST00000522614 776 ntTSL 5 BASIC11.65□□□□□ -0.54
MRPL55Q7Z7F7 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC11.65□□□□□ -0.54
MRPL55Q7Z7F7 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC11.65□□□□□ -0.54
MRPL55Q7Z7F7 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC11.65□□□□□ -0.54
MRPL55Q7Z7F7 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
MRPL55Q7Z7F7 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
MRPL55Q7Z7F7 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
MRPL55Q7Z7F7 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
MRPL55Q7Z7F7 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
MRPL55Q7Z7F7 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC11.65□□□□□ -0.54
MRPL55Q7Z7F7 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
MRPL55Q7Z7F7 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
MRPL55Q7Z7F7 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
MRPL55Q7Z7F7 FLJ16779-201ENST00000612722 7638 ntBASIC11.65□□□□□ -0.54
MRPL55Q7Z7F7 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
MRPL55Q7Z7F7 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC11.65□□□□□ -0.54
MRPL55Q7Z7F7 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
MRPL55Q7Z7F7 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
MRPL55Q7Z7F7 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
MRPL55Q7Z7F7 CYP51A1P1-201ENST00000492267 1507 ntBASIC11.65□□□□□ -0.55
MRPL55Q7Z7F7 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC11.65□□□□□ -0.55
MRPL55Q7Z7F7 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
MRPL55Q7Z7F7 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
MRPL55Q7Z7F7 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
MRPL55Q7Z7F7 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
MRPL55Q7Z7F7 PXK-206ENST00000463280 2825 ntTSL 2 BASIC11.64□□□□□ -0.55
MRPL55Q7Z7F7 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC11.64□□□□□ -0.55
MRPL55Q7Z7F7 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
MRPL55Q7Z7F7 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC11.64□□□□□ -0.55
MRPL55Q7Z7F7 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC11.64□□□□□ -0.55
MRPL55Q7Z7F7 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC11.64□□□□□ -0.55
MRPL55Q7Z7F7 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
MRPL55Q7Z7F7 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
MRPL55Q7Z7F7 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
MRPL55Q7Z7F7 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
MRPL55Q7Z7F7 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
MRPL55Q7Z7F7 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
MRPL55Q7Z7F7 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
MRPL55Q7Z7F7 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
MRPL55Q7Z7F7 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
MRPL55Q7Z7F7 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
MRPL55Q7Z7F7 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
MRPL55Q7Z7F7 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
MRPL55Q7Z7F7 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
MRPL55Q7Z7F7 HIST1H2APS4-201ENST00000362070 348 ntBASIC11.64□□□□□ -0.55
MRPL55Q7Z7F7 MIR149-201ENST00000384879 89 ntBASIC11.64□□□□□ -0.55
MRPL55Q7Z7F7 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
MRPL55Q7Z7F7 KRT18P23-201ENST00000435622 1283 ntBASIC11.64□□□□□ -0.55
MRPL55Q7Z7F7 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC11.64□□□□□ -0.55
MRPL55Q7Z7F7 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
MRPL55Q7Z7F7 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
MRPL55Q7Z7F7 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC11.64□□□□□ -0.55
MRPL55Q7Z7F7 Z99916.2-201ENST00000604037 246 ntBASIC11.64□□□□□ -0.55
MRPL55Q7Z7F7 AP006294.2-201ENST00000641667 209 ntBASIC11.64□□□□□ -0.55
MRPL55Q7Z7F7 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC11.64□□□□□ -0.55
MRPL55Q7Z7F7 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
MRPL55Q7Z7F7 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
MRPL55Q7Z7F7 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
MRPL55Q7Z7F7 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC11.64□□□□□ -0.55
MRPL55Q7Z7F7 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
MRPL55Q7Z7F7 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC11.64□□□□□ -0.55
MRPL55Q7Z7F7 AL163051.1-201ENST00000569214 1512 ntBASIC11.64□□□□□ -0.55
MRPL55Q7Z7F7 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
MRPL55Q7Z7F7 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
MRPL55Q7Z7F7 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC11.64□□□□□ -0.55
MRPL55Q7Z7F7 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
MRPL55Q7Z7F7 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
MRPL55Q7Z7F7 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
MRPL55Q7Z7F7 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC11.64□□□□□ -0.55
MRPL55Q7Z7F7 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
MRPL55Q7Z7F7 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
MRPL55Q7Z7F7 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
MRPL55Q7Z7F7 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
MRPL55Q7Z7F7 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
MRPL55Q7Z7F7 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC11.63□□□□□ -0.55
MRPL55Q7Z7F7 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
MRPL55Q7Z7F7 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC11.63□□□□□ -0.55
MRPL55Q7Z7F7 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC11.63□□□□□ -0.55
MRPL55Q7Z7F7 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
MRPL55Q7Z7F7 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
MRPL55Q7Z7F7 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC11.63□□□□□ -0.55
MRPL55Q7Z7F7 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
MRPL55Q7Z7F7 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
MRPL55Q7Z7F7 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
MRPL55Q7Z7F7 HOXB1-202ENST00000577092 1414 ntBASIC11.63□□□□□ -0.55
MRPL55Q7Z7F7 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
MRPL55Q7Z7F7 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC11.63□□□□□ -0.55
MRPL55Q7Z7F7 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
MRPL55Q7Z7F7 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
MRPL55Q7Z7F7 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC11.63□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms