Protein–RNA interactions for Protein: Q7RTP0

NIPA1, Magnesium transporter NIPA1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPA1Q7RTP0 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NIPA1Q7RTP0 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NIPA1Q7RTP0 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NIPA1Q7RTP0 CD9-202ENST00000382515 1229 ntTSL 5 BASIC20.16■□□□□ 0.82
NIPA1Q7RTP0 FAM220CP-201ENST00000395253 831 ntBASIC20.16■□□□□ 0.82
NIPA1Q7RTP0 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NIPA1Q7RTP0 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NIPA1Q7RTP0 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20.16■□□□□ 0.82
NIPA1Q7RTP0 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
NIPA1Q7RTP0 BMF-207ENST00000559701 630 ntTSL 3 BASIC20.16■□□□□ 0.82
NIPA1Q7RTP0 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NIPA1Q7RTP0 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20.16■□□□□ 0.82
NIPA1Q7RTP0 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NIPA1Q7RTP0 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
NIPA1Q7RTP0 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NIPA1Q7RTP0 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC20.16■□□□□ 0.82
NIPA1Q7RTP0 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NIPA1Q7RTP0 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NIPA1Q7RTP0 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NIPA1Q7RTP0 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NIPA1Q7RTP0 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NIPA1Q7RTP0 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NIPA1Q7RTP0 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.16■□□□□ 0.82
NIPA1Q7RTP0 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
NIPA1Q7RTP0 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC20.16■□□□□ 0.82
NIPA1Q7RTP0 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
NIPA1Q7RTP0 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NIPA1Q7RTP0 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
NIPA1Q7RTP0 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
NIPA1Q7RTP0 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.15■□□□□ 0.82
NIPA1Q7RTP0 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
NIPA1Q7RTP0 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NIPA1Q7RTP0 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NIPA1Q7RTP0 AKR1C7P-201ENST00000305623 895 ntBASIC20.15■□□□□ 0.82
NIPA1Q7RTP0 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NIPA1Q7RTP0 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NIPA1Q7RTP0 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NIPA1Q7RTP0 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
NIPA1Q7RTP0 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC20.15■□□□□ 0.82
NIPA1Q7RTP0 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NIPA1Q7RTP0 SAPCD2P3-201ENST00000455031 850 ntBASIC20.15■□□□□ 0.82
NIPA1Q7RTP0 EMBP1-201ENST00000458200 901 ntBASIC20.15■□□□□ 0.82
NIPA1Q7RTP0 AC122714.2-201ENST00000502787 707 ntBASIC20.15■□□□□ 0.82
NIPA1Q7RTP0 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC20.15■□□□□ 0.82
NIPA1Q7RTP0 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC20.15■□□□□ 0.82
NIPA1Q7RTP0 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NIPA1Q7RTP0 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
NIPA1Q7RTP0 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NIPA1Q7RTP0 AL121894.2-201ENST00000602977 491 ntBASIC20.15■□□□□ 0.82
NIPA1Q7RTP0 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC20.15■□□□□ 0.82
NIPA1Q7RTP0 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
NIPA1Q7RTP0 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
NIPA1Q7RTP0 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20.15■□□□□ 0.82
NIPA1Q7RTP0 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC20.15■□□□□ 0.82
NIPA1Q7RTP0 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NIPA1Q7RTP0 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC20.15■□□□□ 0.82
NIPA1Q7RTP0 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC20.15■□□□□ 0.82
NIPA1Q7RTP0 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NIPA1Q7RTP0 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
NIPA1Q7RTP0 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.15■□□□□ 0.82
NIPA1Q7RTP0 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NIPA1Q7RTP0 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NIPA1Q7RTP0 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.82
NIPA1Q7RTP0 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
NIPA1Q7RTP0 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC20.14■□□□□ 0.82
NIPA1Q7RTP0 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NIPA1Q7RTP0 ABALON-201ENST00000629058 1903 ntBASIC20.14■□□□□ 0.81
NIPA1Q7RTP0 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
NIPA1Q7RTP0 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC20.14■□□□□ 0.81
NIPA1Q7RTP0 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NIPA1Q7RTP0 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NIPA1Q7RTP0 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NIPA1Q7RTP0 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NIPA1Q7RTP0 KRT18P55-202ENST00000578578 1546 ntBASIC20.14■□□□□ 0.81
NIPA1Q7RTP0 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC20.14■□□□□ 0.81
NIPA1Q7RTP0 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC20.14■□□□□ 0.81
NIPA1Q7RTP0 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NIPA1Q7RTP0 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NIPA1Q7RTP0 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
NIPA1Q7RTP0 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NIPA1Q7RTP0 MNT-208ENST00000575394 606 ntTSL 4 BASIC20.14■□□□□ 0.81
NIPA1Q7RTP0 AC116407.2-201ENST00000613639 860 ntBASIC20.14■□□□□ 0.81
NIPA1Q7RTP0 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC20.14■□□□□ 0.81
NIPA1Q7RTP0 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.14■□□□□ 0.81
NIPA1Q7RTP0 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NIPA1Q7RTP0 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
NIPA1Q7RTP0 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.14■□□□□ 0.81
NIPA1Q7RTP0 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NIPA1Q7RTP0 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
NIPA1Q7RTP0 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
NIPA1Q7RTP0 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NIPA1Q7RTP0 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NIPA1Q7RTP0 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NIPA1Q7RTP0 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NIPA1Q7RTP0 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NIPA1Q7RTP0 AC010460.3-201ENST00000511359 1579 ntBASIC20.13■□□□□ 0.81
NIPA1Q7RTP0 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC20.13■□□□□ 0.81
NIPA1Q7RTP0 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NIPA1Q7RTP0 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC20.13■□□□□ 0.81
NIPA1Q7RTP0 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms