Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TUBA1AQ71U36 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TUBA1AQ71U36 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TUBA1AQ71U36 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TUBA1AQ71U36 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TUBA1AQ71U36 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TUBA1AQ71U36 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TUBA1AQ71U36 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TUBA1AQ71U36 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TUBA1AQ71U36 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.69■□□□□ 0.26
TUBA1AQ71U36 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TUBA1AQ71U36 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.69■□□□□ 0.26
TUBA1AQ71U36 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TUBA1AQ71U36 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TUBA1AQ71U36 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TUBA1AQ71U36 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.69■□□□□ 0.26
TUBA1AQ71U36 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TUBA1AQ71U36 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TUBA1AQ71U36 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TUBA1AQ71U36 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
TUBA1AQ71U36 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TUBA1AQ71U36 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
TUBA1AQ71U36 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.69■□□□□ 0.26
TUBA1AQ71U36 CYP2D8P-201ENST00000433633 1490 ntBASIC16.69■□□□□ 0.26
TUBA1AQ71U36 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
TUBA1AQ71U36 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TUBA1AQ71U36 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TUBA1AQ71U36 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TUBA1AQ71U36 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TUBA1AQ71U36 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TUBA1AQ71U36 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.69■□□□□ 0.26
TUBA1AQ71U36 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TUBA1AQ71U36 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
TUBA1AQ71U36 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TUBA1AQ71U36 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.69■□□□□ 0.26
TUBA1AQ71U36 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.69■□□□□ 0.26
TUBA1AQ71U36 FITM1-202ENST00000559294 800 ntBASIC16.69■□□□□ 0.26
TUBA1AQ71U36 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.69■□□□□ 0.26
TUBA1AQ71U36 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.69■□□□□ 0.26
TUBA1AQ71U36 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TUBA1AQ71U36 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TUBA1AQ71U36 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.69■□□□□ 0.26
TUBA1AQ71U36 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TUBA1AQ71U36 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TUBA1AQ71U36 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.69■□□□□ 0.26
TUBA1AQ71U36 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TUBA1AQ71U36 AL118508.1-201ENST00000613502 2345 ntBASIC16.69■□□□□ 0.26
TUBA1AQ71U36 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.69■□□□□ 0.26
TUBA1AQ71U36 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TUBA1AQ71U36 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TUBA1AQ71U36 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.69■□□□□ 0.26
TUBA1AQ71U36 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.69■□□□□ 0.26
TUBA1AQ71U36 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.69■□□□□ 0.26
TUBA1AQ71U36 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TUBA1AQ71U36 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TUBA1AQ71U36 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TUBA1AQ71U36 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
TUBA1AQ71U36 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TUBA1AQ71U36 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.68■□□□□ 0.26
TUBA1AQ71U36 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.68■□□□□ 0.26
TUBA1AQ71U36 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TUBA1AQ71U36 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TUBA1AQ71U36 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.68■□□□□ 0.26
TUBA1AQ71U36 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TUBA1AQ71U36 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TUBA1AQ71U36 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TUBA1AQ71U36 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.68■□□□□ 0.26
TUBA1AQ71U36 NKILA-202ENST00000614771 2598 ntBASIC16.68■□□□□ 0.26
TUBA1AQ71U36 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TUBA1AQ71U36 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
TUBA1AQ71U36 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TUBA1AQ71U36 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.68■□□□□ 0.26
TUBA1AQ71U36 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.68■□□□□ 0.26
TUBA1AQ71U36 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
TUBA1AQ71U36 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TUBA1AQ71U36 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TUBA1AQ71U36 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.68■□□□□ 0.26
TUBA1AQ71U36 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.68■□□□□ 0.26
TUBA1AQ71U36 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TUBA1AQ71U36 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.68■□□□□ 0.26
TUBA1AQ71U36 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
TUBA1AQ71U36 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.68■□□□□ 0.26
TUBA1AQ71U36 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.68■□□□□ 0.26
TUBA1AQ71U36 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.68■□□□□ 0.26
TUBA1AQ71U36 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.68■□□□□ 0.26
TUBA1AQ71U36 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.68■□□□□ 0.26
TUBA1AQ71U36 AC133561.5-201ENST00000635547 218 ntBASIC16.68■□□□□ 0.26
TUBA1AQ71U36 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TUBA1AQ71U36 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TUBA1AQ71U36 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.68■□□□□ 0.26
TUBA1AQ71U36 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TUBA1AQ71U36 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TUBA1AQ71U36 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TUBA1AQ71U36 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TUBA1AQ71U36 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TUBA1AQ71U36 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TUBA1AQ71U36 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.68■□□□□ 0.26
TUBA1AQ71U36 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TUBA1AQ71U36 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TUBA1AQ71U36 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms