Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
CDHR3Q6ZTQ4 AC093010.1-201ENST00000473625 1624 ntBASIC18.14■□□□□ 0.49
CDHR3Q6ZTQ4 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.14■□□□□ 0.49
CDHR3Q6ZTQ4 BX664615.1-201ENST00000443558 458 ntBASIC18.14■□□□□ 0.49
CDHR3Q6ZTQ4 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDHR3Q6ZTQ4 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.14■□□□□ 0.49
CDHR3Q6ZTQ4 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.14■□□□□ 0.49
CDHR3Q6ZTQ4 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.14■□□□□ 0.49
CDHR3Q6ZTQ4 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDHR3Q6ZTQ4 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDHR3Q6ZTQ4 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDHR3Q6ZTQ4 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.14■□□□□ 0.49
CDHR3Q6ZTQ4 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDHR3Q6ZTQ4 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDHR3Q6ZTQ4 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.14■□□□□ 0.49
CDHR3Q6ZTQ4 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDHR3Q6ZTQ4 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDHR3Q6ZTQ4 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDHR3Q6ZTQ4 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDHR3Q6ZTQ4 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDHR3Q6ZTQ4 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.14■□□□□ 0.49
CDHR3Q6ZTQ4 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDHR3Q6ZTQ4 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDHR3Q6ZTQ4 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CDHR3Q6ZTQ4 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDHR3Q6ZTQ4 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDHR3Q6ZTQ4 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.13■□□□□ 0.49
CDHR3Q6ZTQ4 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDHR3Q6ZTQ4 AC036111.1-201ENST00000533973 1582 ntBASIC18.13■□□□□ 0.49
CDHR3Q6ZTQ4 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDHR3Q6ZTQ4 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDHR3Q6ZTQ4 LINC01126-201ENST00000623515 1646 ntBASIC18.13■□□□□ 0.49
CDHR3Q6ZTQ4 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDHR3Q6ZTQ4 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
CDHR3Q6ZTQ4 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDHR3Q6ZTQ4 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDHR3Q6ZTQ4 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDHR3Q6ZTQ4 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDHR3Q6ZTQ4 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDHR3Q6ZTQ4 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDHR3Q6ZTQ4 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDHR3Q6ZTQ4 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDHR3Q6ZTQ4 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
CDHR3Q6ZTQ4 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDHR3Q6ZTQ4 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDHR3Q6ZTQ4 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDHR3Q6ZTQ4 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDHR3Q6ZTQ4 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.13■□□□□ 0.49
CDHR3Q6ZTQ4 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDHR3Q6ZTQ4 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CDHR3Q6ZTQ4 DUX4L26-201ENST00000489078 1255 ntBASIC18.13■□□□□ 0.49
CDHR3Q6ZTQ4 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CDHR3Q6ZTQ4 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDHR3Q6ZTQ4 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.13■□□□□ 0.49
CDHR3Q6ZTQ4 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.13■□□□□ 0.49
CDHR3Q6ZTQ4 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.49
CDHR3Q6ZTQ4 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDHR3Q6ZTQ4 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CDHR3Q6ZTQ4 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDHR3Q6ZTQ4 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDHR3Q6ZTQ4 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDHR3Q6ZTQ4 AC009102.3-201ENST00000623118 1491 ntBASIC18.13■□□□□ 0.49
CDHR3Q6ZTQ4 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDHR3Q6ZTQ4 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDHR3Q6ZTQ4 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDHR3Q6ZTQ4 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.13■□□□□ 0.49
CDHR3Q6ZTQ4 KRT18P55-202ENST00000578578 1546 ntBASIC18.13■□□□□ 0.49
CDHR3Q6ZTQ4 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDHR3Q6ZTQ4 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDHR3Q6ZTQ4 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDHR3Q6ZTQ4 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.12■□□□□ 0.49
CDHR3Q6ZTQ4 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.12■□□□□ 0.49
CDHR3Q6ZTQ4 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDHR3Q6ZTQ4 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.12■□□□□ 0.49
CDHR3Q6ZTQ4 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
CDHR3Q6ZTQ4 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDHR3Q6ZTQ4 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CDHR3Q6ZTQ4 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDHR3Q6ZTQ4 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDHR3Q6ZTQ4 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDHR3Q6ZTQ4 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDHR3Q6ZTQ4 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.12■□□□□ 0.49
CDHR3Q6ZTQ4 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.12■□□□□ 0.49
CDHR3Q6ZTQ4 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDHR3Q6ZTQ4 AC141257.4-201ENST00000634557 245 ntBASIC18.12■□□□□ 0.49
CDHR3Q6ZTQ4 AC136944.6-201ENST00000634818 245 ntBASIC18.12■□□□□ 0.49
CDHR3Q6ZTQ4 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDHR3Q6ZTQ4 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.12■□□□□ 0.49
CDHR3Q6ZTQ4 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDHR3Q6ZTQ4 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
CDHR3Q6ZTQ4 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDHR3Q6ZTQ4 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.12■□□□□ 0.49
CDHR3Q6ZTQ4 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDHR3Q6ZTQ4 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDHR3Q6ZTQ4 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CDHR3Q6ZTQ4 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CDHR3Q6ZTQ4 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDHR3Q6ZTQ4 AC022211.2-201ENST00000585075 2527 ntBASIC18.11■□□□□ 0.49
CDHR3Q6ZTQ4 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDHR3Q6ZTQ4 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 142.8 ms