Protein–RNA interactions for Protein: Q6IMN6

CAPRIN2, Caprin-2, humanhuman

Known RBP Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN2Q6IMN6 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CAPRIN2Q6IMN6 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.33■□□□□ 0.52
CAPRIN2Q6IMN6 AC068587.9-201ENST00000641814 219 ntBASIC18.33■□□□□ 0.52
CAPRIN2Q6IMN6 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CAPRIN2Q6IMN6 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.33■□□□□ 0.52
CAPRIN2Q6IMN6 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CAPRIN2Q6IMN6 ESPNP-201ENST00000270691 2015 ntBASIC18.33■□□□□ 0.52
CAPRIN2Q6IMN6 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CAPRIN2Q6IMN6 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CAPRIN2Q6IMN6 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CAPRIN2Q6IMN6 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CAPRIN2Q6IMN6 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
CAPRIN2Q6IMN6 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CAPRIN2Q6IMN6 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.32■□□□□ 0.52
CAPRIN2Q6IMN6 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.32■□□□□ 0.52
CAPRIN2Q6IMN6 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.32■□□□□ 0.52
CAPRIN2Q6IMN6 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CAPRIN2Q6IMN6 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CAPRIN2Q6IMN6 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CAPRIN2Q6IMN6 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.32■□□□□ 0.52
CAPRIN2Q6IMN6 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CAPRIN2Q6IMN6 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
CAPRIN2Q6IMN6 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.32■□□□□ 0.52
CAPRIN2Q6IMN6 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CAPRIN2Q6IMN6 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CAPRIN2Q6IMN6 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
CAPRIN2Q6IMN6 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CAPRIN2Q6IMN6 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CAPRIN2Q6IMN6 ABALON-201ENST00000629058 1903 ntBASIC18.32■□□□□ 0.52
CAPRIN2Q6IMN6 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CAPRIN2Q6IMN6 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CAPRIN2Q6IMN6 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CAPRIN2Q6IMN6 BX664615.1-201ENST00000443558 458 ntBASIC18.32■□□□□ 0.52
CAPRIN2Q6IMN6 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CAPRIN2Q6IMN6 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.32■□□□□ 0.52
CAPRIN2Q6IMN6 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.32■□□□□ 0.52
CAPRIN2Q6IMN6 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.32■□□□□ 0.52
CAPRIN2Q6IMN6 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.32■□□□□ 0.52
CAPRIN2Q6IMN6 MIR3180-5-201ENST00000583743 153 ntBASIC18.32■□□□□ 0.52
CAPRIN2Q6IMN6 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.32■□□□□ 0.52
CAPRIN2Q6IMN6 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CAPRIN2Q6IMN6 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CAPRIN2Q6IMN6 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.32■□□□□ 0.52
CAPRIN2Q6IMN6 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CAPRIN2Q6IMN6 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CAPRIN2Q6IMN6 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.32■□□□□ 0.52
CAPRIN2Q6IMN6 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC18.32■□□□□ 0.52
CAPRIN2Q6IMN6 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CAPRIN2Q6IMN6 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CAPRIN2Q6IMN6 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CAPRIN2Q6IMN6 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.32■□□□□ 0.52
CAPRIN2Q6IMN6 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CAPRIN2Q6IMN6 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CAPRIN2Q6IMN6 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CAPRIN2Q6IMN6 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CAPRIN2Q6IMN6 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CAPRIN2Q6IMN6 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CAPRIN2Q6IMN6 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CAPRIN2Q6IMN6 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CAPRIN2Q6IMN6 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CAPRIN2Q6IMN6 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CAPRIN2Q6IMN6 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CAPRIN2Q6IMN6 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CAPRIN2Q6IMN6 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
CAPRIN2Q6IMN6 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CAPRIN2Q6IMN6 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CAPRIN2Q6IMN6 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CAPRIN2Q6IMN6 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CAPRIN2Q6IMN6 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CAPRIN2Q6IMN6 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CAPRIN2Q6IMN6 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.31■□□□□ 0.52
CAPRIN2Q6IMN6 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.31■□□□□ 0.52
CAPRIN2Q6IMN6 AC104076.2-201ENST00000448912 469 ntBASIC18.31■□□□□ 0.52
CAPRIN2Q6IMN6 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CAPRIN2Q6IMN6 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.31■□□□□ 0.52
CAPRIN2Q6IMN6 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.31■□□□□ 0.52
CAPRIN2Q6IMN6 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.31■□□□□ 0.52
CAPRIN2Q6IMN6 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.31■□□□□ 0.52
CAPRIN2Q6IMN6 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CAPRIN2Q6IMN6 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.31■□□□□ 0.52
CAPRIN2Q6IMN6 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
CAPRIN2Q6IMN6 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CAPRIN2Q6IMN6 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CAPRIN2Q6IMN6 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CAPRIN2Q6IMN6 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.31■□□□□ 0.52
CAPRIN2Q6IMN6 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CAPRIN2Q6IMN6 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.31■□□□□ 0.52
CAPRIN2Q6IMN6 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CAPRIN2Q6IMN6 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CAPRIN2Q6IMN6 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CAPRIN2Q6IMN6 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CAPRIN2Q6IMN6 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.3■□□□□ 0.52
CAPRIN2Q6IMN6 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CAPRIN2Q6IMN6 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CAPRIN2Q6IMN6 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CAPRIN2Q6IMN6 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
CAPRIN2Q6IMN6 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CAPRIN2Q6IMN6 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CAPRIN2Q6IMN6 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CAPRIN2Q6IMN6 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms