Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
PTPN20Q4JDL3 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
PTPN20Q4JDL3 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
PTPN20Q4JDL3 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19■□□□□ 0.63
PTPN20Q4JDL3 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PTPN20Q4JDL3 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19■□□□□ 0.63
PTPN20Q4JDL3 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19■□□□□ 0.63
PTPN20Q4JDL3 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19■□□□□ 0.63
PTPN20Q4JDL3 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PTPN20Q4JDL3 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PTPN20Q4JDL3 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19■□□□□ 0.63
PTPN20Q4JDL3 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19■□□□□ 0.63
PTPN20Q4JDL3 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19■□□□□ 0.63
PTPN20Q4JDL3 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19■□□□□ 0.63
PTPN20Q4JDL3 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19■□□□□ 0.63
PTPN20Q4JDL3 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19■□□□□ 0.63
PTPN20Q4JDL3 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19■□□□□ 0.63
PTPN20Q4JDL3 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19■□□□□ 0.63
PTPN20Q4JDL3 AL121956.5-201ENST00000625261 221 ntBASIC19■□□□□ 0.63
PTPN20Q4JDL3 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PTPN20Q4JDL3 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
PTPN20Q4JDL3 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
PTPN20Q4JDL3 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PTPN20Q4JDL3 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PTPN20Q4JDL3 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PTPN20Q4JDL3 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
PTPN20Q4JDL3 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PTPN20Q4JDL3 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PTPN20Q4JDL3 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PTPN20Q4JDL3 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PTPN20Q4JDL3 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PTPN20Q4JDL3 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19■□□□□ 0.63
PTPN20Q4JDL3 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19■□□□□ 0.63
PTPN20Q4JDL3 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.99■□□□□ 0.63
PTPN20Q4JDL3 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTPN20Q4JDL3 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTPN20Q4JDL3 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.99■□□□□ 0.63
PTPN20Q4JDL3 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.99■□□□□ 0.63
PTPN20Q4JDL3 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
PTPN20Q4JDL3 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTPN20Q4JDL3 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTPN20Q4JDL3 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PTPN20Q4JDL3 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
PTPN20Q4JDL3 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
PTPN20Q4JDL3 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.99■□□□□ 0.63
PTPN20Q4JDL3 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PTPN20Q4JDL3 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTPN20Q4JDL3 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTPN20Q4JDL3 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.99■□□□□ 0.63
PTPN20Q4JDL3 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.99■□□□□ 0.63
PTPN20Q4JDL3 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTPN20Q4JDL3 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.99■□□□□ 0.63
PTPN20Q4JDL3 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.99■□□□□ 0.63
PTPN20Q4JDL3 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.99■□□□□ 0.63
PTPN20Q4JDL3 AL590326.2-201ENST00000625139 305 ntBASIC18.99■□□□□ 0.63
PTPN20Q4JDL3 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTPN20Q4JDL3 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PTPN20Q4JDL3 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.99■□□□□ 0.63
PTPN20Q4JDL3 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PTPN20Q4JDL3 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
PTPN20Q4JDL3 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTPN20Q4JDL3 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTPN20Q4JDL3 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PTPN20Q4JDL3 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PTPN20Q4JDL3 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTPN20Q4JDL3 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.99■□□□□ 0.63
PTPN20Q4JDL3 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PTPN20Q4JDL3 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTPN20Q4JDL3 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
PTPN20Q4JDL3 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.98■□□□□ 0.63
PTPN20Q4JDL3 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
PTPN20Q4JDL3 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTPN20Q4JDL3 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PTPN20Q4JDL3 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
PTPN20Q4JDL3 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
PTPN20Q4JDL3 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
PTPN20Q4JDL3 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTPN20Q4JDL3 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTPN20Q4JDL3 TSPY12P-201ENST00000421279 868 ntBASIC18.98■□□□□ 0.63
PTPN20Q4JDL3 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.98■□□□□ 0.63
PTPN20Q4JDL3 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.98■□□□□ 0.63
PTPN20Q4JDL3 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PTPN20Q4JDL3 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTPN20Q4JDL3 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTPN20Q4JDL3 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.98■□□□□ 0.63
PTPN20Q4JDL3 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.98■□□□□ 0.63
PTPN20Q4JDL3 AC005332.8-201ENST00000622750 2735 ntBASIC18.98■□□□□ 0.63
PTPN20Q4JDL3 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTPN20Q4JDL3 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.98■□□□□ 0.63
PTPN20Q4JDL3 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTPN20Q4JDL3 AC012317.2-201ENST00000623305 2251 ntBASIC18.98■□□□□ 0.63
PTPN20Q4JDL3 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTPN20Q4JDL3 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTPN20Q4JDL3 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.98■□□□□ 0.63
PTPN20Q4JDL3 AC005332.1-201ENST00000577698 1310 ntBASIC18.98■□□□□ 0.63
PTPN20Q4JDL3 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PTPN20Q4JDL3 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTPN20Q4JDL3 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
PTPN20Q4JDL3 AC134043.2-201ENST00000624206 2238 ntBASIC18.97■□□□□ 0.63
PTPN20Q4JDL3 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms