Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.29■□□□□ 0.68
CTC1Q2NKJ3 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTC1Q2NKJ3 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CTC1Q2NKJ3 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC19.28■□□□□ 0.68
CTC1Q2NKJ3 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CTC1Q2NKJ3 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.28■□□□□ 0.68
CTC1Q2NKJ3 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CTC1Q2NKJ3 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CTC1Q2NKJ3 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CTC1Q2NKJ3 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTC1Q2NKJ3 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.28■□□□□ 0.68
CTC1Q2NKJ3 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
CTC1Q2NKJ3 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CTC1Q2NKJ3 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CTC1Q2NKJ3 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC19.28■□□□□ 0.68
CTC1Q2NKJ3 AC010327.4-202ENST00000591484 748 ntBASIC19.28■□□□□ 0.68
CTC1Q2NKJ3 AC005336.2-201ENST00000593183 939 ntBASIC19.28■□□□□ 0.68
CTC1Q2NKJ3 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC19.28■□□□□ 0.68
CTC1Q2NKJ3 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.28■□□□□ 0.68
CTC1Q2NKJ3 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CTC1Q2NKJ3 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.28■□□□□ 0.68
CTC1Q2NKJ3 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CTC1Q2NKJ3 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTC1Q2NKJ3 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTC1Q2NKJ3 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTC1Q2NKJ3 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.28■□□□□ 0.68
CTC1Q2NKJ3 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CTC1Q2NKJ3 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTC1Q2NKJ3 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CTC1Q2NKJ3 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.27■□□□□ 0.68
CTC1Q2NKJ3 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CTC1Q2NKJ3 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CTC1Q2NKJ3 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CTC1Q2NKJ3 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CTC1Q2NKJ3 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CTC1Q2NKJ3 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
CTC1Q2NKJ3 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CTC1Q2NKJ3 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CTC1Q2NKJ3 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CTC1Q2NKJ3 MED15P5-201ENST00000423150 992 ntBASIC19.27■□□□□ 0.68
CTC1Q2NKJ3 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.27■□□□□ 0.68
CTC1Q2NKJ3 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.27■□□□□ 0.68
CTC1Q2NKJ3 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.27■□□□□ 0.68
CTC1Q2NKJ3 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CTC1Q2NKJ3 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CTC1Q2NKJ3 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
CTC1Q2NKJ3 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CTC1Q2NKJ3 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CTC1Q2NKJ3 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CTC1Q2NKJ3 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
CTC1Q2NKJ3 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CTC1Q2NKJ3 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CTC1Q2NKJ3 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CTC1Q2NKJ3 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CTC1Q2NKJ3 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
CTC1Q2NKJ3 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTC1Q2NKJ3 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTC1Q2NKJ3 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CTC1Q2NKJ3 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.26■□□□□ 0.67
CTC1Q2NKJ3 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTC1Q2NKJ3 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTC1Q2NKJ3 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.26■□□□□ 0.67
CTC1Q2NKJ3 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTC1Q2NKJ3 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTC1Q2NKJ3 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC19.26■□□□□ 0.67
CTC1Q2NKJ3 FIS1-203ENST00000442303 631 ntTSL 3 BASIC19.26■□□□□ 0.67
CTC1Q2NKJ3 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTC1Q2NKJ3 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
CTC1Q2NKJ3 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC19.26■□□□□ 0.67
CTC1Q2NKJ3 AC112482.1-201ENST00000492080 688 ntBASIC19.26■□□□□ 0.67
CTC1Q2NKJ3 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CTC1Q2NKJ3 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CTC1Q2NKJ3 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTC1Q2NKJ3 AC021087.4-201ENST00000563761 564 ntBASIC19.26■□□□□ 0.67
CTC1Q2NKJ3 PAM16-208ENST00000573553 722 ntTSL 2 BASIC19.26■□□□□ 0.67
CTC1Q2NKJ3 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC19.26■□□□□ 0.67
CTC1Q2NKJ3 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CTC1Q2NKJ3 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
CTC1Q2NKJ3 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC19.26■□□□□ 0.67
CTC1Q2NKJ3 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CTC1Q2NKJ3 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CTC1Q2NKJ3 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CTC1Q2NKJ3 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTC1Q2NKJ3 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTC1Q2NKJ3 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTC1Q2NKJ3 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CTC1Q2NKJ3 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CTC1Q2NKJ3 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CTC1Q2NKJ3 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTC1Q2NKJ3 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.25■□□□□ 0.67
CTC1Q2NKJ3 FEM1AP3-201ENST00000403722 1741 ntBASIC19.25■□□□□ 0.67
CTC1Q2NKJ3 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.25■□□□□ 0.67
CTC1Q2NKJ3 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.25■□□□□ 0.67
CTC1Q2NKJ3 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
CTC1Q2NKJ3 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CTC1Q2NKJ3 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.25■□□□□ 0.67
CTC1Q2NKJ3 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTC1Q2NKJ3 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CTC1Q2NKJ3 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTC1Q2NKJ3 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms