Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RSPO4Q2I0M5 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.43■□□□□ 0.38
RSPO4Q2I0M5 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
RSPO4Q2I0M5 PDPK2P-202ENST00000562415 1191 ntBASIC17.43■□□□□ 0.38
RSPO4Q2I0M5 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RSPO4Q2I0M5 CECR7-204ENST00000609932 568 ntTSL 2 BASIC17.43■□□□□ 0.38
RSPO4Q2I0M5 LINC00628-201ENST00000628516 1289 ntBASIC17.43■□□□□ 0.38
RSPO4Q2I0M5 AL513210.1-201ENST00000629608 234 ntBASIC17.43■□□□□ 0.38
RSPO4Q2I0M5 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.43■□□□□ 0.38
RSPO4Q2I0M5 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RSPO4Q2I0M5 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
RSPO4Q2I0M5 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.43■□□□□ 0.38
RSPO4Q2I0M5 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RSPO4Q2I0M5 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RSPO4Q2I0M5 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RSPO4Q2I0M5 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RSPO4Q2I0M5 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.43■□□□□ 0.38
RSPO4Q2I0M5 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
RSPO4Q2I0M5 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RSPO4Q2I0M5 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RSPO4Q2I0M5 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
RSPO4Q2I0M5 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RSPO4Q2I0M5 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RSPO4Q2I0M5 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RSPO4Q2I0M5 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
RSPO4Q2I0M5 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RSPO4Q2I0M5 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RSPO4Q2I0M5 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC17.42■□□□□ 0.38
RSPO4Q2I0M5 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RSPO4Q2I0M5 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RSPO4Q2I0M5 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RSPO4Q2I0M5 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RSPO4Q2I0M5 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RSPO4Q2I0M5 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.42■□□□□ 0.38
RSPO4Q2I0M5 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
RSPO4Q2I0M5 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RSPO4Q2I0M5 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RSPO4Q2I0M5 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.42■□□□□ 0.38
RSPO4Q2I0M5 AC002472.2-201ENST00000442739 958 ntBASIC17.42■□□□□ 0.38
RSPO4Q2I0M5 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RSPO4Q2I0M5 AC108073.2-201ENST00000464002 357 ntBASIC17.42■□□□□ 0.38
RSPO4Q2I0M5 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.42■□□□□ 0.38
RSPO4Q2I0M5 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.42■□□□□ 0.38
RSPO4Q2I0M5 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.42■□□□□ 0.38
RSPO4Q2I0M5 MIR6752-201ENST00000618442 71 ntBASIC17.42■□□□□ 0.38
RSPO4Q2I0M5 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
RSPO4Q2I0M5 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
RSPO4Q2I0M5 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RSPO4Q2I0M5 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RSPO4Q2I0M5 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
RSPO4Q2I0M5 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RSPO4Q2I0M5 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RSPO4Q2I0M5 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
RSPO4Q2I0M5 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RSPO4Q2I0M5 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.42■□□□□ 0.38
RSPO4Q2I0M5 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RSPO4Q2I0M5 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RSPO4Q2I0M5 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RSPO4Q2I0M5 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.42■□□□□ 0.38
RSPO4Q2I0M5 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.41■□□□□ 0.38
RSPO4Q2I0M5 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RSPO4Q2I0M5 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RSPO4Q2I0M5 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.41■□□□□ 0.38
RSPO4Q2I0M5 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RSPO4Q2I0M5 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RSPO4Q2I0M5 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RSPO4Q2I0M5 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RSPO4Q2I0M5 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
RSPO4Q2I0M5 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.41■□□□□ 0.38
RSPO4Q2I0M5 AC004461.1-201ENST00000412461 403 ntBASIC17.41■□□□□ 0.38
RSPO4Q2I0M5 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.41■□□□□ 0.38
RSPO4Q2I0M5 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.41■□□□□ 0.38
RSPO4Q2I0M5 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.41■□□□□ 0.38
RSPO4Q2I0M5 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RSPO4Q2I0M5 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RSPO4Q2I0M5 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RSPO4Q2I0M5 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RSPO4Q2I0M5 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.41■□□□□ 0.38
RSPO4Q2I0M5 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.41■□□□□ 0.38
RSPO4Q2I0M5 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.41■□□□□ 0.38
RSPO4Q2I0M5 AL163051.1-201ENST00000569214 1512 ntBASIC17.41■□□□□ 0.38
RSPO4Q2I0M5 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RSPO4Q2I0M5 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RSPO4Q2I0M5 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RSPO4Q2I0M5 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RSPO4Q2I0M5 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RSPO4Q2I0M5 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RSPO4Q2I0M5 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.4■□□□□ 0.38
RSPO4Q2I0M5 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RSPO4Q2I0M5 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.4■□□□□ 0.38
RSPO4Q2I0M5 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RSPO4Q2I0M5 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
RSPO4Q2I0M5 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.4■□□□□ 0.38
RSPO4Q2I0M5 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.4■□□□□ 0.38
RSPO4Q2I0M5 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.4■□□□□ 0.38
RSPO4Q2I0M5 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
RSPO4Q2I0M5 DUX4L27-201ENST00000554796 1261 ntBASIC17.4■□□□□ 0.38
RSPO4Q2I0M5 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.4■□□□□ 0.38
RSPO4Q2I0M5 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.4■□□□□ 0.38
RSPO4Q2I0M5 AC004817.3-201ENST00000602957 2129 ntBASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms