Protein–RNA interactions for Protein: Q05655

PRKCD, Protein kinase C delta type, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCDQ05655 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.66■□□□□ 0.26
PRKCDQ05655 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRKCDQ05655 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PRKCDQ05655 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC16.66■□□□□ 0.26
PRKCDQ05655 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
PRKCDQ05655 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRKCDQ05655 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.66■□□□□ 0.26
PRKCDQ05655 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.66■□□□□ 0.26
PRKCDQ05655 TSPY17P-201ENST00000450329 467 ntBASIC16.66■□□□□ 0.26
PRKCDQ05655 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.66■□□□□ 0.26
PRKCDQ05655 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PRKCDQ05655 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.66■□□□□ 0.26
PRKCDQ05655 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRKCDQ05655 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
PRKCDQ05655 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRKCDQ05655 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PRKCDQ05655 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.66■□□□□ 0.26
PRKCDQ05655 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.66■□□□□ 0.26
PRKCDQ05655 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRKCDQ05655 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PRKCDQ05655 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRKCDQ05655 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
PRKCDQ05655 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.65■□□□□ 0.26
PRKCDQ05655 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PRKCDQ05655 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRKCDQ05655 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRKCDQ05655 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRKCDQ05655 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRKCDQ05655 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRKCDQ05655 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
PRKCDQ05655 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRKCDQ05655 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.65■□□□□ 0.26
PRKCDQ05655 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.65■□□□□ 0.26
PRKCDQ05655 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PRKCDQ05655 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRKCDQ05655 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRKCDQ05655 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PRKCDQ05655 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRKCDQ05655 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.65■□□□□ 0.26
PRKCDQ05655 SLC25A1P2-201ENST00000430693 912 ntBASIC16.65■□□□□ 0.26
PRKCDQ05655 KRT18P23-201ENST00000435622 1283 ntBASIC16.65■□□□□ 0.26
PRKCDQ05655 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.65■□□□□ 0.26
PRKCDQ05655 AP003041.3-201ENST00000527151 707 ntBASIC16.65■□□□□ 0.26
PRKCDQ05655 AL353719.1-201ENST00000566847 864 ntBASIC16.65■□□□□ 0.26
PRKCDQ05655 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRKCDQ05655 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PRKCDQ05655 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.65■□□□□ 0.26
PRKCDQ05655 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.65■□□□□ 0.26
PRKCDQ05655 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.65■□□□□ 0.26
PRKCDQ05655 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRKCDQ05655 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRKCDQ05655 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.65■□□□□ 0.26
PRKCDQ05655 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRKCDQ05655 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
PRKCDQ05655 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PRKCDQ05655 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PRKCDQ05655 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.65■□□□□ 0.26
PRKCDQ05655 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRKCDQ05655 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRKCDQ05655 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
PRKCDQ05655 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRKCDQ05655 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.64■□□□□ 0.25
PRKCDQ05655 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PRKCDQ05655 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
PRKCDQ05655 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.64■□□□□ 0.25
PRKCDQ05655 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRKCDQ05655 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.64■□□□□ 0.25
PRKCDQ05655 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.64■□□□□ 0.25
PRKCDQ05655 AP003071.4-201ENST00000562276 1284 ntBASIC16.64■□□□□ 0.25
PRKCDQ05655 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC16.64■□□□□ 0.25
PRKCDQ05655 WWOX-216ENST00000569818 525 ntBASIC16.64■□□□□ 0.25
PRKCDQ05655 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.64■□□□□ 0.25
PRKCDQ05655 Z99916.2-201ENST00000604037 246 ntBASIC16.64■□□□□ 0.25
PRKCDQ05655 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRKCDQ05655 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRKCDQ05655 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRKCDQ05655 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PRKCDQ05655 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.64■□□□□ 0.25
PRKCDQ05655 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.64■□□□□ 0.25
PRKCDQ05655 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRKCDQ05655 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PRKCDQ05655 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PRKCDQ05655 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRKCDQ05655 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRKCDQ05655 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.64■□□□□ 0.25
PRKCDQ05655 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRKCDQ05655 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRKCDQ05655 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRKCDQ05655 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRKCDQ05655 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.25
PRKCDQ05655 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.64■□□□□ 0.25
PRKCDQ05655 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.64■□□□□ 0.25
PRKCDQ05655 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PRKCDQ05655 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.63■□□□□ 0.25
PRKCDQ05655 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.63■□□□□ 0.25
PRKCDQ05655 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRKCDQ05655 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRKCDQ05655 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRKCDQ05655 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRKCDQ05655 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms