Protein–RNA interactions for Protein: Q00587

CDC42EP1, Cdc42 effector protein 1, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1Q00587 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.63■□□□□ 0.73
CDC42EP1Q00587 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDC42EP1Q00587 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDC42EP1Q00587 MED22-202ENST00000371999 987 ntTSL 3 BASIC19.63■□□□□ 0.73
CDC42EP1Q00587 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDC42EP1Q00587 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDC42EP1Q00587 KRT18P67-201ENST00000432816 1264 ntBASIC19.63■□□□□ 0.73
CDC42EP1Q00587 AC103564.2-201ENST00000432853 1299 ntBASIC19.63■□□□□ 0.73
CDC42EP1Q00587 AC007967.3-201ENST00000434308 558 ntBASIC19.63■□□□□ 0.73
CDC42EP1Q00587 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC19.63■□□□□ 0.73
CDC42EP1Q00587 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC19.63■□□□□ 0.73
CDC42EP1Q00587 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC19.63■□□□□ 0.73
CDC42EP1Q00587 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
CDC42EP1Q00587 AL773604.1-201ENST00000617417 272 ntBASIC19.63■□□□□ 0.73
CDC42EP1Q00587 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC19.63■□□□□ 0.73
CDC42EP1Q00587 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDC42EP1Q00587 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDC42EP1Q00587 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
CDC42EP1Q00587 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDC42EP1Q00587 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.63■□□□□ 0.73
CDC42EP1Q00587 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CDC42EP1Q00587 BCL2-203ENST00000589955 5011 ntBASIC19.63■□□□□ 0.73
CDC42EP1Q00587 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.63■□□□□ 0.73
CDC42EP1Q00587 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CDC42EP1Q00587 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDC42EP1Q00587 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDC42EP1Q00587 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDC42EP1Q00587 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDC42EP1Q00587 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.62■□□□□ 0.73
CDC42EP1Q00587 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CDC42EP1Q00587 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CDC42EP1Q00587 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDC42EP1Q00587 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.62■□□□□ 0.73
CDC42EP1Q00587 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDC42EP1Q00587 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDC42EP1Q00587 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CDC42EP1Q00587 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDC42EP1Q00587 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
CDC42EP1Q00587 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDC42EP1Q00587 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDC42EP1Q00587 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CDC42EP1Q00587 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDC42EP1Q00587 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDC42EP1Q00587 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDC42EP1Q00587 RPS2P28-201ENST00000314255 741 ntBASIC19.62■□□□□ 0.73
CDC42EP1Q00587 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC19.62■□□□□ 0.73
CDC42EP1Q00587 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDC42EP1Q00587 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDC42EP1Q00587 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDC42EP1Q00587 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDC42EP1Q00587 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC19.62■□□□□ 0.73
CDC42EP1Q00587 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC19.62■□□□□ 0.73
CDC42EP1Q00587 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDC42EP1Q00587 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC19.62■□□□□ 0.73
CDC42EP1Q00587 FGFR3P6-201ENST00000457012 610 ntBASIC19.62■□□□□ 0.73
CDC42EP1Q00587 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19.62■□□□□ 0.73
CDC42EP1Q00587 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
CDC42EP1Q00587 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CDC42EP1Q00587 AC116407.2-201ENST00000613639 860 ntBASIC19.62■□□□□ 0.73
CDC42EP1Q00587 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CDC42EP1Q00587 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDC42EP1Q00587 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDC42EP1Q00587 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDC42EP1Q00587 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC19.62■□□□□ 0.73
CDC42EP1Q00587 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.62■□□□□ 0.73
CDC42EP1Q00587 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDC42EP1Q00587 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDC42EP1Q00587 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDC42EP1Q00587 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDC42EP1Q00587 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
CDC42EP1Q00587 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDC42EP1Q00587 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDC42EP1Q00587 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.61■□□□□ 0.73
CDC42EP1Q00587 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC19.61■□□□□ 0.73
CDC42EP1Q00587 AC093677.2-201ENST00000600169 1863 ntBASIC19.61■□□□□ 0.73
CDC42EP1Q00587 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CDC42EP1Q00587 HLA-A-201ENST00000376802 1334 ntBASIC19.61■□□□□ 0.73
CDC42EP1Q00587 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.61■□□□□ 0.73
CDC42EP1Q00587 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDC42EP1Q00587 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDC42EP1Q00587 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
CDC42EP1Q00587 MRPL3P1-201ENST00000400109 1033 ntBASIC19.61■□□□□ 0.73
CDC42EP1Q00587 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC19.61■□□□□ 0.73
CDC42EP1Q00587 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.61■□□□□ 0.73
CDC42EP1Q00587 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.61■□□□□ 0.73
CDC42EP1Q00587 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CDC42EP1Q00587 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC19.61■□□□□ 0.73
CDC42EP1Q00587 AP001269.4-201ENST00000609611 512 ntBASIC19.61■□□□□ 0.73
CDC42EP1Q00587 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC19.61■□□□□ 0.73
CDC42EP1Q00587 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDC42EP1Q00587 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDC42EP1Q00587 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDC42EP1Q00587 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.61■□□□□ 0.73
CDC42EP1Q00587 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDC42EP1Q00587 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDC42EP1Q00587 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDC42EP1Q00587 AL096828.2-201ENST00000567259 1965 ntBASIC19.61■□□□□ 0.73
CDC42EP1Q00587 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDC42EP1Q00587 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDC42EP1Q00587 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms