Protein–RNA interactions for Protein: P78364

PHC1, Polyhomeotic-like protein 1, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1P78364 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PHC1P78364 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PHC1P78364 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
PHC1P78364 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PHC1P78364 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
PHC1P78364 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PHC1P78364 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PHC1P78364 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PHC1P78364 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
PHC1P78364 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PHC1P78364 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PHC1P78364 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PHC1P78364 MIR718-201ENST00000390190 70 ntBASIC17.22■□□□□ 0.35
PHC1P78364 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.22■□□□□ 0.35
PHC1P78364 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.22■□□□□ 0.35
PHC1P78364 CCR12P-201ENST00000446203 998 ntBASIC17.22■□□□□ 0.35
PHC1P78364 TSPY15P-201ENST00000457163 923 ntBASIC17.22■□□□□ 0.35
PHC1P78364 AL355075.4-201ENST00000554988 638 ntBASIC17.22■□□□□ 0.35
PHC1P78364 MIR3180-4-201ENST00000582223 153 ntBASIC17.22■□□□□ 0.35
PHC1P78364 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PHC1P78364 AC116562.4-202ENST00000641738 218 ntBASIC17.22■□□□□ 0.35
PHC1P78364 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
PHC1P78364 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PHC1P78364 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PHC1P78364 AC108860.2-201ENST00000562760 2183 ntBASIC17.22■□□□□ 0.35
PHC1P78364 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PHC1P78364 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.22■□□□□ 0.35
PHC1P78364 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
PHC1P78364 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.21■□□□□ 0.35
PHC1P78364 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PHC1P78364 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PHC1P78364 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PHC1P78364 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PHC1P78364 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PHC1P78364 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PHC1P78364 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PHC1P78364 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
PHC1P78364 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PHC1P78364 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.21■□□□□ 0.35
PHC1P78364 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PHC1P78364 AC132938.6-201ENST00000623828 1655 ntBASIC17.21■□□□□ 0.35
PHC1P78364 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.21■□□□□ 0.35
PHC1P78364 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PHC1P78364 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PHC1P78364 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.21■□□□□ 0.35
PHC1P78364 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
PHC1P78364 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PHC1P78364 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.21■□□□□ 0.35
PHC1P78364 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.21■□□□□ 0.35
PHC1P78364 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.21■□□□□ 0.35
PHC1P78364 MIR4785-201ENST00000585005 73 ntBASIC17.21■□□□□ 0.35
PHC1P78364 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
PHC1P78364 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PHC1P78364 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PHC1P78364 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
PHC1P78364 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PHC1P78364 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.21■□□□□ 0.35
PHC1P78364 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
PHC1P78364 KRT8P9-201ENST00000558927 1449 ntBASIC17.21■□□□□ 0.34
PHC1P78364 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
PHC1P78364 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PHC1P78364 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.2■□□□□ 0.34
PHC1P78364 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PHC1P78364 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
PHC1P78364 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PHC1P78364 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PHC1P78364 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
PHC1P78364 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PHC1P78364 CYP2D8P-201ENST00000433633 1490 ntBASIC17.2■□□□□ 0.34
PHC1P78364 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
PHC1P78364 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PHC1P78364 TSPY14P-201ENST00000303979 915 ntBASIC17.2■□□□□ 0.34
PHC1P78364 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PHC1P78364 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PHC1P78364 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.2■□□□□ 0.34
PHC1P78364 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.2■□□□□ 0.34
PHC1P78364 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.2■□□□□ 0.34
PHC1P78364 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PHC1P78364 AC010240.3-201ENST00000607688 395 ntBASIC17.2■□□□□ 0.34
PHC1P78364 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.2■□□□□ 0.34
PHC1P78364 AC010653.2-201ENST00000623505 997 ntBASIC17.2■□□□□ 0.34
PHC1P78364 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PHC1P78364 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.2■□□□□ 0.34
PHC1P78364 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PHC1P78364 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PHC1P78364 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PHC1P78364 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PHC1P78364 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PHC1P78364 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PHC1P78364 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PHC1P78364 AC124067.4-201ENST00000519691 2379 ntBASIC17.2■□□□□ 0.34
PHC1P78364 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PHC1P78364 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PHC1P78364 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PHC1P78364 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.19■□□□□ 0.34
PHC1P78364 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
PHC1P78364 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PHC1P78364 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PHC1P78364 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PHC1P78364 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms