Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GABREP78334 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
GABREP78334 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.13■□□□□ 0.33
GABREP78334 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GABREP78334 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
GABREP78334 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.13■□□□□ 0.33
GABREP78334 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.13■□□□□ 0.33
GABREP78334 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.13■□□□□ 0.33
GABREP78334 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.13■□□□□ 0.33
GABREP78334 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.13■□□□□ 0.33
GABREP78334 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GABREP78334 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.13■□□□□ 0.33
GABREP78334 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.13■□□□□ 0.33
GABREP78334 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.13■□□□□ 0.33
GABREP78334 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.13■□□□□ 0.33
GABREP78334 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GABREP78334 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GABREP78334 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.13■□□□□ 0.33
GABREP78334 AL024508.2-201ENST00000607749 1894 ntBASIC17.13■□□□□ 0.33
GABREP78334 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
GABREP78334 AC087289.5-201ENST00000586076 3175 ntBASIC17.13■□□□□ 0.33
GABREP78334 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.13■□□□□ 0.33
GABREP78334 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GABREP78334 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.13■□□□□ 0.33
GABREP78334 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GABREP78334 LINC00602-201ENST00000629776 2065 ntBASIC17.12■□□□□ 0.33
GABREP78334 BX323043.1-201ENST00000641006 1765 ntBASIC17.12■□□□□ 0.33
GABREP78334 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GABREP78334 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GABREP78334 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GABREP78334 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
GABREP78334 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
GABREP78334 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GABREP78334 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.12■□□□□ 0.33
GABREP78334 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GABREP78334 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GABREP78334 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GABREP78334 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GABREP78334 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GABREP78334 AC112482.1-201ENST00000492080 688 ntBASIC17.12■□□□□ 0.33
GABREP78334 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.12■□□□□ 0.33
GABREP78334 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.12■□□□□ 0.33
GABREP78334 AC105339.3-201ENST00000560043 636 ntBASIC17.12■□□□□ 0.33
GABREP78334 AC027796.2-201ENST00000575326 344 ntBASIC17.12■□□□□ 0.33
GABREP78334 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
GABREP78334 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GABREP78334 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GABREP78334 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.12■□□□□ 0.33
GABREP78334 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GABREP78334 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GABREP78334 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
GABREP78334 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.12■□□□□ 0.33
GABREP78334 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.12■□□□□ 0.33
GABREP78334 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GABREP78334 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GABREP78334 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.12■□□□□ 0.33
GABREP78334 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GABREP78334 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
GABREP78334 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.12■□□□□ 0.33
GABREP78334 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.12■□□□□ 0.33
GABREP78334 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GABREP78334 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
GABREP78334 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GABREP78334 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
GABREP78334 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
GABREP78334 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
GABREP78334 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.11■□□□□ 0.33
GABREP78334 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GABREP78334 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GABREP78334 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GABREP78334 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.11■□□□□ 0.33
GABREP78334 AC007967.2-201ENST00000432613 625 ntBASIC17.11■□□□□ 0.33
GABREP78334 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.11■□□□□ 0.33
GABREP78334 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
GABREP78334 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GABREP78334 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
GABREP78334 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.11■□□□□ 0.33
GABREP78334 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.11■□□□□ 0.33
GABREP78334 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GABREP78334 MTDHP4-201ENST00000600287 670 ntBASIC17.11■□□□□ 0.33
GABREP78334 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
GABREP78334 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GABREP78334 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
GABREP78334 SDHAP2-201ENST00000455183 2001 ntBASIC17.11■□□□□ 0.33
GABREP78334 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GABREP78334 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GABREP78334 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
GABREP78334 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GABREP78334 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
GABREP78334 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GABREP78334 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GABREP78334 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GABREP78334 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.1■□□□□ 0.33
GABREP78334 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GABREP78334 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
GABREP78334 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GABREP78334 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
GABREP78334 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
GABREP78334 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.1■□□□□ 0.33
GABREP78334 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms