Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.91■□□□□ 0.94
HERVK_113P62684 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HERVK_113P62684 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
HERVK_113P62684 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HERVK_113P62684 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC20.91■□□□□ 0.94
HERVK_113P62684 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HERVK_113P62684 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HERVK_113P62684 AC092865.5-201ENST00000545435 363 ntBASIC20.91■□□□□ 0.94
HERVK_113P62684 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC20.91■□□□□ 0.94
HERVK_113P62684 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HERVK_113P62684 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.91■□□□□ 0.94
HERVK_113P62684 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC20.91■□□□□ 0.94
HERVK_113P62684 AC116407.3-201ENST00000623905 1129 ntBASIC20.91■□□□□ 0.94
HERVK_113P62684 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HERVK_113P62684 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HERVK_113P62684 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.9■□□□□ 0.94
HERVK_113P62684 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
HERVK_113P62684 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HERVK_113P62684 AC125634.1-201ENST00000438758 1403 ntBASIC20.9■□□□□ 0.94
HERVK_113P62684 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HERVK_113P62684 PMS2P7-201ENST00000506558 1336 ntBASIC20.9■□□□□ 0.94
HERVK_113P62684 AC007613.1-201ENST00000572811 2597 ntBASIC20.9■□□□□ 0.94
HERVK_113P62684 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
HERVK_113P62684 PIN1-206ENST00000587625 878 ntTSL 2 BASIC20.9■□□□□ 0.94
HERVK_113P62684 TERC-201ENST00000602385 541 ntBASIC20.9■□□□□ 0.94
HERVK_113P62684 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC20.9■□□□□ 0.94
HERVK_113P62684 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC20.9■□□□□ 0.94
HERVK_113P62684 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HERVK_113P62684 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HERVK_113P62684 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
HERVK_113P62684 LINC00602-201ENST00000629776 2065 ntBASIC20.9■□□□□ 0.94
HERVK_113P62684 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
HERVK_113P62684 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.9■□□□□ 0.94
HERVK_113P62684 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HERVK_113P62684 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HERVK_113P62684 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
HERVK_113P62684 AC104581.1-202ENST00000635932 2618 ntBASIC20.9■□□□□ 0.94
HERVK_113P62684 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
HERVK_113P62684 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.89■□□□□ 0.94
HERVK_113P62684 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
HERVK_113P62684 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
HERVK_113P62684 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
HERVK_113P62684 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC20.89■□□□□ 0.93
HERVK_113P62684 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
HERVK_113P62684 FABP5-202ENST00000396359 986 ntTSL 5 BASIC20.89■□□□□ 0.93
HERVK_113P62684 MIR940-201ENST00000401276 94 ntBASIC20.89■□□□□ 0.93
HERVK_113P62684 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC20.89■□□□□ 0.93
HERVK_113P62684 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC20.89■□□□□ 0.93
HERVK_113P62684 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC20.89■□□□□ 0.93
HERVK_113P62684 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
HERVK_113P62684 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HERVK_113P62684 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HERVK_113P62684 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.89■□□□□ 0.93
HERVK_113P62684 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.89■□□□□ 0.93
HERVK_113P62684 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HERVK_113P62684 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC20.89■□□□□ 0.93
HERVK_113P62684 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
HERVK_113P62684 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HERVK_113P62684 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.88■□□□□ 0.93
HERVK_113P62684 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.88■□□□□ 0.93
HERVK_113P62684 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
HERVK_113P62684 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
HERVK_113P62684 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
HERVK_113P62684 AP005117.1-201ENST00000584346 1413 ntBASIC20.88■□□□□ 0.93
HERVK_113P62684 ZNF259P1-201ENST00000407656 1365 ntBASIC20.88■□□□□ 0.93
HERVK_113P62684 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.88■□□□□ 0.93
HERVK_113P62684 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HERVK_113P62684 RPS2P28-201ENST00000314255 741 ntBASIC20.88■□□□□ 0.93
HERVK_113P62684 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HERVK_113P62684 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.88■□□□□ 0.93
HERVK_113P62684 RBSN-204ENST00000449050 903 ntTSL 2 BASIC20.88■□□□□ 0.93
HERVK_113P62684 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
HERVK_113P62684 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
HERVK_113P62684 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC20.88■□□□□ 0.93
HERVK_113P62684 PAM16-208ENST00000573553 722 ntTSL 2 BASIC20.88■□□□□ 0.93
HERVK_113P62684 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC20.88■□□□□ 0.93
HERVK_113P62684 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.88■□□□□ 0.93
HERVK_113P62684 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.88■□□□□ 0.93
HERVK_113P62684 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
HERVK_113P62684 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
HERVK_113P62684 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.88■□□□□ 0.93
HERVK_113P62684 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
HERVK_113P62684 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HERVK_113P62684 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.88■□□□□ 0.93
HERVK_113P62684 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
HERVK_113P62684 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC20.87■□□□□ 0.93
HERVK_113P62684 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.87■□□□□ 0.93
HERVK_113P62684 AC009113.1-201ENST00000570267 2443 ntBASIC20.87■□□□□ 0.93
HERVK_113P62684 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
HERVK_113P62684 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
HERVK_113P62684 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC20.87■□□□□ 0.93
HERVK_113P62684 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC20.87■□□□□ 0.93
HERVK_113P62684 FUOM-202ENST00000368551 628 ntTSL 3 BASIC20.87■□□□□ 0.93
HERVK_113P62684 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC20.87■□□□□ 0.93
HERVK_113P62684 SART3-203ENST00000546611 1184 ntBASIC20.87■□□□□ 0.93
HERVK_113P62684 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC20.87■□□□□ 0.93
HERVK_113P62684 AC021087.4-201ENST00000563761 564 ntBASIC20.87■□□□□ 0.93
HERVK_113P62684 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC20.87■□□□□ 0.93
HERVK_113P62684 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC20.87■□□□□ 0.93
HERVK_113P62684 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms