Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP46P62068 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
USP46P62068 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
USP46P62068 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
USP46P62068 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP46P62068 TPM4P1-201ENST00000436100 807 ntBASIC18.96■□□□□ 0.63
USP46P62068 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.96■□□□□ 0.63
USP46P62068 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.96■□□□□ 0.63
USP46P62068 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.96■□□□□ 0.63
USP46P62068 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP46P62068 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP46P62068 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP46P62068 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP46P62068 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP46P62068 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP46P62068 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP46P62068 PHGDH-209ENST00000641074 1780 ntBASIC18.96■□□□□ 0.63
USP46P62068 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP46P62068 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
USP46P62068 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP46P62068 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP46P62068 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.95■□□□□ 0.62
USP46P62068 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.95■□□□□ 0.62
USP46P62068 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.95■□□□□ 0.62
USP46P62068 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.95■□□□□ 0.62
USP46P62068 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.95■□□□□ 0.62
USP46P62068 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP46P62068 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
USP46P62068 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.95■□□□□ 0.62
USP46P62068 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
USP46P62068 NOC2LP1-202ENST00000452600 2235 ntBASIC18.95■□□□□ 0.62
USP46P62068 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP46P62068 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP46P62068 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
USP46P62068 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.95■□□□□ 0.62
USP46P62068 MTCL1P1-201ENST00000446207 792 ntBASIC18.95■□□□□ 0.62
USP46P62068 MINOS1P3-201ENST00000457048 203 ntBASIC18.95■□□□□ 0.62
USP46P62068 EMBP1-201ENST00000458200 901 ntBASIC18.95■□□□□ 0.62
USP46P62068 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
USP46P62068 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.95■□□□□ 0.62
USP46P62068 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.95■□□□□ 0.62
USP46P62068 BNIP3P18-201ENST00000593976 575 ntBASIC18.95■□□□□ 0.62
USP46P62068 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
USP46P62068 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.95■□□□□ 0.62
USP46P62068 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP46P62068 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
USP46P62068 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP46P62068 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.95■□□□□ 0.62
USP46P62068 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP46P62068 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.95■□□□□ 0.62
USP46P62068 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
USP46P62068 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
USP46P62068 AL138781.2-201ENST00000617896 1843 ntBASIC18.95■□□□□ 0.62
USP46P62068 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
USP46P62068 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
USP46P62068 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
USP46P62068 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
USP46P62068 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
USP46P62068 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
USP46P62068 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
USP46P62068 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.94■□□□□ 0.62
USP46P62068 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
USP46P62068 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
USP46P62068 NUS1P2-201ENST00000417358 873 ntBASIC18.94■□□□□ 0.62
USP46P62068 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.94■□□□□ 0.62
USP46P62068 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.94■□□□□ 0.62
USP46P62068 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
USP46P62068 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.94■□□□□ 0.62
USP46P62068 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.94■□□□□ 0.62
USP46P62068 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
USP46P62068 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
USP46P62068 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
USP46P62068 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
USP46P62068 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
USP46P62068 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
USP46P62068 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
USP46P62068 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP46P62068 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.93■□□□□ 0.62
USP46P62068 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.93■□□□□ 0.62
USP46P62068 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
USP46P62068 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
USP46P62068 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP46P62068 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
USP46P62068 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP46P62068 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
USP46P62068 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.93■□□□□ 0.62
USP46P62068 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
USP46P62068 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP46P62068 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP46P62068 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
USP46P62068 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.93■□□□□ 0.62
USP46P62068 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.93■□□□□ 0.62
USP46P62068 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP46P62068 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP46P62068 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP46P62068 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
USP46P62068 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.93■□□□□ 0.62
USP46P62068 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP46P62068 AC026396.1-201ENST00000419388 421 ntBASIC18.93■□□□□ 0.62
USP46P62068 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms