Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDH11P55287 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH11P55287 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.58■□□□□ 0.24
CDH11P55287 PRORSD1P-202ENST00000563365 2154 ntBASIC16.58■□□□□ 0.24
CDH11P55287 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDH11P55287 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH11P55287 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH11P55287 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDH11P55287 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH11P55287 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDH11P55287 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
CDH11P55287 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.57■□□□□ 0.24
CDH11P55287 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.57■□□□□ 0.24
CDH11P55287 AL096828.2-201ENST00000567259 1965 ntBASIC16.57■□□□□ 0.24
CDH11P55287 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.57■□□□□ 0.24
CDH11P55287 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH11P55287 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CDH11P55287 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
CDH11P55287 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.57■□□□□ 0.24
CDH11P55287 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH11P55287 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.57■□□□□ 0.24
CDH11P55287 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH11P55287 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH11P55287 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.57■□□□□ 0.24
CDH11P55287 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CDH11P55287 SLC25A1P2-201ENST00000430693 912 ntBASIC16.57■□□□□ 0.24
CDH11P55287 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.57■□□□□ 0.24
CDH11P55287 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.57■□□□□ 0.24
CDH11P55287 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDH11P55287 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.57■□□□□ 0.24
CDH11P55287 AC010203.1-204ENST00000548782 407 ntBASIC16.57■□□□□ 0.24
CDH11P55287 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.57■□□□□ 0.24
CDH11P55287 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.57■□□□□ 0.24
CDH11P55287 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDH11P55287 AL445228.2-201ENST00000605589 952 ntBASIC16.57■□□□□ 0.24
CDH11P55287 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH11P55287 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH11P55287 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDH11P55287 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH11P55287 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.57■□□□□ 0.24
CDH11P55287 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDH11P55287 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH11P55287 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH11P55287 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH11P55287 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.57■□□□□ 0.24
CDH11P55287 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.57■□□□□ 0.24
CDH11P55287 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
CDH11P55287 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.56■□□□□ 0.24
CDH11P55287 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDH11P55287 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.56■□□□□ 0.24
CDH11P55287 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH11P55287 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH11P55287 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH11P55287 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH11P55287 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.56■□□□□ 0.24
CDH11P55287 AC073508.3-201ENST00000619697 1419 ntBASIC16.56■□□□□ 0.24
CDH11P55287 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CDH11P55287 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CDH11P55287 AC012317.2-201ENST00000623305 2251 ntBASIC16.56■□□□□ 0.24
CDH11P55287 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH11P55287 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.56■□□□□ 0.24
CDH11P55287 ARMC10P1-201ENST00000313754 855 ntBASIC16.56■□□□□ 0.24
CDH11P55287 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDH11P55287 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDH11P55287 HMGA1P5-201ENST00000412453 271 ntBASIC16.56■□□□□ 0.24
CDH11P55287 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.56■□□□□ 0.24
CDH11P55287 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.56■□□□□ 0.24
CDH11P55287 KRT18P35-201ENST00000510488 1269 ntBASIC16.56■□□□□ 0.24
CDH11P55287 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
CDH11P55287 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
CDH11P55287 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDH11P55287 SIRPAP1-201ENST00000448467 1770 ntBASIC16.56■□□□□ 0.24
CDH11P55287 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH11P55287 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.56■□□□□ 0.24
CDH11P55287 AL109659.2-201ENST00000606809 1674 ntBASIC16.56■□□□□ 0.24
CDH11P55287 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
CDH11P55287 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH11P55287 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDH11P55287 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH11P55287 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.56■□□□□ 0.24
CDH11P55287 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.56■□□□□ 0.24
CDH11P55287 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
CDH11P55287 GMCL1P1-201ENST00000463439 1581 ntBASIC16.55■□□□□ 0.24
CDH11P55287 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.55■□□□□ 0.24
CDH11P55287 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH11P55287 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDH11P55287 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.55■□□□□ 0.24
CDH11P55287 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH11P55287 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.55■□□□□ 0.24
CDH11P55287 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH11P55287 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH11P55287 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDH11P55287 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH11P55287 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH11P55287 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
CDH11P55287 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH11P55287 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH11P55287 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH11P55287 INGX-201ENST00000359239 846 ntBASIC16.55■□□□□ 0.24
CDH11P55287 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms