Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 HOXB1-202ENST00000577092 1414 ntBASIC20.28■□□□□ 0.84
EPHB4P54760 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
EPHB4P54760 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
EPHB4P54760 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
EPHB4P54760 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
EPHB4P54760 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
EPHB4P54760 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
EPHB4P54760 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
EPHB4P54760 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
EPHB4P54760 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20.28■□□□□ 0.84
EPHB4P54760 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
EPHB4P54760 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
EPHB4P54760 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
EPHB4P54760 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
EPHB4P54760 MIR564-202ENST00000385049 94 ntBASIC20.28■□□□□ 0.84
EPHB4P54760 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC20.28■□□□□ 0.84
EPHB4P54760 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
EPHB4P54760 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC20.28■□□□□ 0.84
EPHB4P54760 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC20.28■□□□□ 0.84
EPHB4P54760 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC20.28■□□□□ 0.84
EPHB4P54760 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC20.28■□□□□ 0.84
EPHB4P54760 LITAF-211ENST00000572255 516 ntTSL 4 BASIC20.28■□□□□ 0.84
EPHB4P54760 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
EPHB4P54760 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.28■□□□□ 0.84
EPHB4P54760 BNIP3P18-201ENST00000593976 575 ntBASIC20.28■□□□□ 0.84
EPHB4P54760 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
EPHB4P54760 AL139424.1-201ENST00000607572 797 ntBASIC20.28■□□□□ 0.84
EPHB4P54760 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
EPHB4P54760 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
EPHB4P54760 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.28■□□□□ 0.84
EPHB4P54760 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
EPHB4P54760 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
EPHB4P54760 AC022898.2-201ENST00000616822 1312 ntBASIC20.27■□□□□ 0.84
EPHB4P54760 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
EPHB4P54760 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
EPHB4P54760 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
EPHB4P54760 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
EPHB4P54760 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
EPHB4P54760 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.27■□□□□ 0.84
EPHB4P54760 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
EPHB4P54760 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
EPHB4P54760 AL109659.2-201ENST00000606809 1674 ntBASIC20.27■□□□□ 0.84
EPHB4P54760 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
EPHB4P54760 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
EPHB4P54760 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
EPHB4P54760 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
EPHB4P54760 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
EPHB4P54760 AC093909.1-201ENST00000504731 1122 ntBASIC20.27■□□□□ 0.84
EPHB4P54760 PGAM5P1-201ENST00000518923 814 ntBASIC20.27■□□□□ 0.84
EPHB4P54760 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC20.27■□□□□ 0.84
EPHB4P54760 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
EPHB4P54760 AC139887.3-201ENST00000568585 713 ntBASIC20.27■□□□□ 0.84
EPHB4P54760 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
EPHB4P54760 MIR5100-201ENST00000579544 119 ntBASIC20.27■□□□□ 0.84
EPHB4P54760 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC20.27■□□□□ 0.84
EPHB4P54760 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC20.27■□□□□ 0.84
EPHB4P54760 AL591684.3-201ENST00000605187 298 ntBASIC20.27■□□□□ 0.84
EPHB4P54760 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
EPHB4P54760 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
EPHB4P54760 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
EPHB4P54760 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
EPHB4P54760 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
EPHB4P54760 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
EPHB4P54760 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
EPHB4P54760 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
EPHB4P54760 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
EPHB4P54760 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
EPHB4P54760 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.26■□□□□ 0.83
EPHB4P54760 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
EPHB4P54760 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
EPHB4P54760 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
EPHB4P54760 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
EPHB4P54760 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.26■□□□□ 0.83
EPHB4P54760 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
EPHB4P54760 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
EPHB4P54760 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
EPHB4P54760 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
EPHB4P54760 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
EPHB4P54760 VENTXP7-201ENST00000475503 772 ntBASIC20.26■□□□□ 0.83
EPHB4P54760 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC20.26■□□□□ 0.83
EPHB4P54760 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC20.26■□□□□ 0.83
EPHB4P54760 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC20.26■□□□□ 0.83
EPHB4P54760 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
EPHB4P54760 WIZP1-201ENST00000531444 2299 ntBASIC20.26■□□□□ 0.83
EPHB4P54760 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.26■□□□□ 0.83
EPHB4P54760 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
EPHB4P54760 RCC2P3-201ENST00000418112 1537 ntBASIC20.26■□□□□ 0.83
EPHB4P54760 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
EPHB4P54760 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
EPHB4P54760 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
EPHB4P54760 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.26■□□□□ 0.83
EPHB4P54760 KRT8P7-201ENST00000533003 1432 ntBASIC20.26■□□□□ 0.83
EPHB4P54760 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
EPHB4P54760 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC20.26■□□□□ 0.83
EPHB4P54760 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
EPHB4P54760 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
EPHB4P54760 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
EPHB4P54760 PCDHB18P-201ENST00000524813 2368 ntBASIC20.26■□□□□ 0.83
EPHB4P54760 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
EPHB4P54760 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms